RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SFMBT1Q9UHJ3 866 aa9.83□□□□□ -0.84
COL6A4P1-201ENST00000446690 PHF24Q9UPV7 400 aa9.83□□□□□ -0.84
COL6A4P1-201ENST00000446690 MRPL42Q9Y6G3 142 aaKnown RBP9.83□□□□□ -0.84
COL6A4P1-201ENST00000446690 TEX264Q9Y6I9 313 aa9.83□□□□□ -0.84
COL6A4P1-201ENST00000446690 IKBKGQ9Y6K9 419 aa9.83□□□□□ -0.84
COL6A4P1-201ENST00000446690 HACD1B0YJ81 288 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 NT5C1B-RDH14C9J2C7 533 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 KCNK1O00180 336 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 RNF103O00237 685 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PPP1R12AO14974 1030 aaPredicted RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 INPPL1O15357 1258 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 CHRM1P11229 460 aaPredicted RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 EPHB2P29323 1055 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 GRIA1P42261 906 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 GPR15P49685 360 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 AIF1P55008 147 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 DPYSQ14117 519 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PDK1Q15118 436 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 KLHL38Q2WGJ6 581 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 FAM171A1Q5VUB5 890 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 RWDD4Q6NW29 188 aaKnown RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 C4orf22Q6V702 233 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 TRABD2AQ86V40 505 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 CAND1Q86VP6 1230 aaKnown RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 AGGF1Q8N302 714 aaeCLIP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 GPR152Q8TDT2 470 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 DQX1Q8TE96 717 aaKnown RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 NTAN1Q96AB6 310 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 DEFB118Q96PH6 123 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 SMC6Q96SB8 1091 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PAFAH2Q99487 392 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PHACTR1Q9C0D0 580 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PIH1D1Q9NWS0 290 aaKnown RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 EURLQ9NYK6 297 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 HCSTQ9UBK5 93 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 ZC3H7BQ9UGR2 993 aaKnown RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 SLC24A2Q9UI40 661 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 A0A0A0MRY4 1105 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 TCRBV9S1A1TA0A576 114 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 SRRM3A6NNA2 597 aaPredicted RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 DCLK1O15075 740 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 MSI1O43347 362 aaKnown RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 CPP00450 1065 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 ALDH2P05091 517 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 STX2P32856 288 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PBX3P40426 434 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 CXCR3P49682 368 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 NR1H3Q13133 447 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 GPNMBQ14956 572 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PAFAH1B3Q15102 231 aaKnown RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 KBTBD12Q3ZCT8 623 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 CTXN3Q4LDR2 81 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 VARS2Q5ST30 1063 aaKnown RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PDZD4Q76G19 769 aaPredicted RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PID1Q7Z2X4 250 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 TDRPQ86YL5 185 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 CTAGE3PQ8IX95 158 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 FAM126BQ8IXS8 530 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 LRRC34Q8IZ02 419 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 DCP1BQ8IZD4 617 aaKnown RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 DEPDC1BQ8WUY9 529 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 PGAP3Q96FM1 320 aaPredicted RBP9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 SCLYQ96I15 445 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 SPATA13Q96N96 652 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 EPAS1Q99814 870 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 ACSS3Q9H6R3 686 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 ABCC13Q9NSE7 274 aa9.82□□□□□ -0.84
COL6A4P1-201ENST00000446690 GOLGA8RI6L899 631 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 OAZ2O95190 189 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 KRT4P19013 534 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 DRD4P21917 467 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 GBP2P32456 591 aaPredicted RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 CDK7P50613 346 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 CCL23P55773 120 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 CORO7P57737 925 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 SCAPQ12770 1279 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 MTFR1Q15390 333 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 GKAP1Q5VSY0 366 aaPredicted RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 CASC4Q6P4E1 433 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 MPP5Q8N3R9 675 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 PDCD7Q8N8D1 485 aaKnown RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 SEPT8Q92599 483 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 SEC16BQ96JE7 1060 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 ZNF317Q96PQ6 595 aaPredicted RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 CYTH2Q99418 400 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 TRIM56Q9BRZ2 755 aaKnown RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 ZCWPW1Q9H0M4 648 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 PRDM16Q9HAZ2 1276 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 FAM169AQ9Y6X4 670 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 A0A1W2PQH9 124 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 FAM47DPA6NHR8 397 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 TCP11X1B4DZS4 312 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 DNM1LO00429 736 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 SOAT2O75908 522 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 LRIG2O94898 1065 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 MOCS2O96007 188 aaPredicted RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 SARNPP82979 210 aaKnown RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 IFT88Q13099 833 aa9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 PRKD1Q15139 912 aaPredicted RBP9.81□□□□□ -0.84
COL6A4P1-201ENST00000446690 PLEKHG4Q58EX7 1191 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms