RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 NRG4Q8WWG1 115 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 PCYT2Q99447 389 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 POPDC2Q9HBU9 364 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 SIX4Q9UIU6 781 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 APPL1Q9UKG1 709 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 CDY2AQ9Y6F7 541 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 CDY1Q9Y6F8 540 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 LYNP07948 512 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 PSEN1P49768 467 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 PPP1R15BQ5SWA1 713 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 DEFB106AQ8N104 65 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 ABTB1Q969K4 478 aaPredicted RBP12.2□□□□□ -0.46
MSH6-204ENST00000445503 C7orf26Q96N11 449 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 PCDHA11Q9Y5I1 949 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 A0A096LPK6 155 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 PAPSS1O43252 624 aaPredicted RBP12.2□□□□□ -0.46
MSH6-204ENST00000445503 TSHRP16473 764 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 ARF4P18085 180 aaPredicted RBP12.2□□□□□ -0.46
MSH6-204ENST00000445503 TPI1P60174 286 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 SLC18A2Q05940 514 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 OLIG2Q13516 323 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 PRPSAP1Q14558 356 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 PACS1Q6VY07 963 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 AFG1LQ8WV93 481 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 CATSPER2Q96P56 530 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 OLFM3Q96PB7 478 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 PANX3Q96QZ0 392 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 NUF2Q9BZD4 464 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 TRPV6Q9H1D0 765 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 FAM96AQ9H5X1 160 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 WDR55Q9H6Y2 383 aaPredicted RBP12.2□□□□□ -0.46
MSH6-204ENST00000445503 STAP1Q9ULZ2 295 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 TNFSF13BQ9Y275 285 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 COMMD10Q9Y6G5 202 aa12.2□□□□□ -0.46
MSH6-204ENST00000445503 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 HCRTO43612 131 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 AHCYL1O43865 530 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 GAS2O43903 313 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 ITGA2BP08514 1039 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TFE3P19532 575 aaPredicted RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 MRPS22P82650 360 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 OCRLQ01968 901 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 PDK1Q15118 436 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 STILQ15468 1287 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TBCCQ15814 346 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 KYAT3Q6YP21 454 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 SNX32Q86XE0 403 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TRIML2Q8N7C3 387 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TDRD5Q8NAT2 981 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 SLC2A14Q8TDB8 520 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TEPSINQ96N21 525 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 WDR83Q9BRX9 315 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 EBF3Q9H4W6 596 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 CLIC5Q9NZA1 410 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 MFHAS1Q9Y4C4 1052 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 AK5Q9Y6K8 562 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 NUMBLQ9Y6R0 609 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 MYO18AQ92614 2054 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 COL5A3P25940 1745 aaPredicted RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 KIF3CO14782 793 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 PHGDHO43175 533 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 PFDN1O60925 122 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 ARIH2O95376 493 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 ATICP31939 592 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 CAND1Q86VP6 1230 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 OR6Y1Q8NGX8 325 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 MCRS1Q96EZ8 462 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 CDRT15Q96T59 188 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 KCNK13Q9HB14 408 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 SYBUQ9NX95 663 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 PIN4Q9Y237 131 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 C3orf70A6NLC5 250 aaPredicted RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 DFFAO00273 331 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TGFB3P10600 412 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 CRHR1P34998 444 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 PTPN7P35236 360 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 FDFT1P37268 417 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 RARS2Q5T160 578 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 KRT80Q6KB66 452 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 DHDDSQ86SQ9 333 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 ARHGAP18Q8N392 663 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 SPATA6LQ8N4H0 392 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 MIPOL1Q8TD10 442 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 LRRC39Q96DD0 335 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TUBGCP5Q96RT8 1024 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TBCBQ99426 244 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 ILKAPQ9H0C8 392 aaPredicted RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 MMADHCQ9H3L0 296 aaPredicted RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 PRDM12Q9H4Q4 367 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TMEM216Q9P0N5 145 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 EPS15L1Q9UBC2 864 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 FETUBQ9UGM5 382 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 CNTN6Q9UQ52 1028 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 SSX2IPQ9Y2D8 614 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 E7ESA3 106 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TRAFD1O14545 582 aaPredicted RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 ONECUT3O60422 494 aaPredicted RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 SIN3BO75182 1162 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 RFPL1O75677 317 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms