RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 TBX20Q9UMR3 447 aa4.55□□□□□ -1.68
LINC01004-201ENST00000445184 CYP46A1Q9Y6A2 500 aa4.55□□□□□ -1.68
LINC01004-201ENST00000445184 CACNA1IQ9P0X4 2223 aa4.55□□□□□ -1.68
LINC01004-201ENST00000445184 WDR62O43379 1518 aa4.55□□□□□ -1.68
LINC01004-201ENST00000445184 AATKQ6ZMQ8 1374 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 TDRD9Q8NDG6 1382 aaKnown RBP4.54□□□□□ -1.68
LINC01004-201ENST00000445184 PGPEP1LA6NFU8 196 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 WIPF3A6NGB9 483 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 M0QZQ0 153 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 TSPAN3O60637 253 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 ERN1O75460 977 aaKnown RBP4.54□□□□□ -1.68
LINC01004-201ENST00000445184 CER1O95813 267 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 RPS6KB1P23443 525 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 NTSR1P30989 418 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 NPTX2P47972 431 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 RPS7P62081 194 aaKnown RBP4.54□□□□□ -1.68
LINC01004-201ENST00000445184 IRX6P78412 446 aaPredicted RBP4.54□□□□□ -1.68
LINC01004-201ENST00000445184 HSD11B2P80365 405 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 MRPS35P82673 323 aaKnown RBP4.54□□□□□ -1.68
LINC01004-201ENST00000445184 SATB1Q01826 763 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 SLC12A1Q13621 1099 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 E2F2Q14209 437 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 CSHL1Q14406 222 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 KCNJ12Q14500 433 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 TBRG1Q3YBR2 411 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 CTXN3Q4LDR2 81 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 AKNAD1Q5T1N1 836 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 NAA35Q5VZE5 725 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 ICE2Q659A1 982 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 RUSC1-AS1Q66K80 236 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 ATG16L1Q676U5 607 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 LAYNQ6UX15 382 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 ZNF517Q6ZMY9 492 aaPredicted RBP4.54□□□□□ -1.68
LINC01004-201ENST00000445184 C4orf50Q6ZRC1 276 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 RRAGAQ7L523 313 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 GPR149Q86SP6 731 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 DTX2Q86UW9 622 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 MAPKAPK5Q8IW41 473 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 SLC15A3Q8IY34 581 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 SPARTQ8N0X7 666 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 TMEM132CQ8N3T6 1108 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.54□□□□□ -1.68
LINC01004-201ENST00000445184 CCDC89Q8N998 374 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 CEP70Q8NHQ1 597 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 OVCA2Q8WZ82 227 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 DDB2Q92466 427 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 CTHRC1Q96CG8 243 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 GRAMD1AQ96CP6 724 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 HVCN1Q96D96 273 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 MCRS1Q96EZ8 462 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 HIST1H2AAQ96QV6 131 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 HAPLN3Q96S86 360 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 ZSWIM1Q9BR11 485 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 MECRQ9BV79 373 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 UNKLQ9H9P5 680 aaKnown RBP4.54□□□□□ -1.68
LINC01004-201ENST00000445184 NOD2Q9HC29 1040 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 ASB6Q9NWX5 421 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 KCND3Q9UK17 655 aa4.54□□□□□ -1.68
LINC01004-201ENST00000445184 USP15Q9Y4E8 981 aaPredicted RBP4.54□□□□□ -1.68
LINC01004-201ENST00000445184 MBD3L5A6NJ08 208 aaPredicted RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ZSCAN9O15535 394 aaPredicted RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 HNRNPA1P09651 372 aaKnown RBP eCLIP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ADORA2AP29274 412 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 PSMC2P35998 433 aaKnown RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 CASP6P55212 293 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 FAM3BP58499 235 aaPredicted RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 SF3A3Q12874 501 aaKnown RBP eCLIP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 PDE1CQ14123 709 aaPredicted RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ANKRD1Q15327 319 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 MEA1Q16626 185 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 SPDYE7PQ495Y7 208 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ZNF484Q5JVG2 852 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 RBM20Q5T481 1227 aaKnown RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 L1TD1Q5T7N2 865 aaKnown RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ARHGAP40Q5TG30 622 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 C11orf87Q6NUJ2 197 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 INO80CQ6PI98 192 aaPredicted RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 SLC30A10Q6XR72 485 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ANKRD52Q8NB46 1076 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 TDRD7Q8NHU6 1098 aaKnown RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 TBC1D22AQ8WUA7 517 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 TMEM171Q8WVE6 324 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 SOCS4Q8WXH5 440 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ATG4AQ8WYN0 398 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ZUFSPQ96AP4 578 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 WDYHV1Q96HA8 205 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ZBTB45Q96K62 511 aaPredicted RBP4.53□□□□□ -1.68
LINC01004-201ENST00000445184 CHODLQ9H9P2 273 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 PLEKHA5Q9HAU0 1116 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ASAP1Q9ULH1 1129 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 USP22Q9UPT9 525 aa4.53□□□□□ -1.68
LINC01004-201ENST00000445184 ZNF804BA4D1E1 1349 aa4.52□□□□□ -1.69
LINC01004-201ENST00000445184 A8MVJ9 347 aa4.52□□□□□ -1.69
LINC01004-201ENST00000445184 KIF28PB7ZC32 967 aa4.52□□□□□ -1.69
LINC01004-201ENST00000445184 STX16-NPEPL1H3BU86 382 aa4.52□□□□□ -1.69
LINC01004-201ENST00000445184 STX16O14662 325 aa4.52□□□□□ -1.69
LINC01004-201ENST00000445184 PROM1O43490 865 aa4.52□□□□□ -1.69
LINC01004-201ENST00000445184 RGS10O43665 173 aa4.52□□□□□ -1.69
LINC01004-201ENST00000445184 WDR47O94967 919 aa4.52□□□□□ -1.69
LINC01004-201ENST00000445184 HEXIM1O94992 359 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms