RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 NPPBP16860 134 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 PRKCAP17252 672 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 PTX3P26022 381 aaPredicted RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 AVPR2P30518 371 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 PSMC2P35998 433 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 SLC8A3P57103 927 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 CYP27A1Q02318 531 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RING1Q06587 406 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 GAMTQ14353 236 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.1□□□□□ -1.75
UBR3-206ENST00000444475 HS1BP3Q53T59 392 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 SGO2Q562F6 1265 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 C3orf38Q5JPI3 329 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 EFHC1Q5JVL4 640 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 NAA35Q5VZE5 725 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 FBXO38Q6PIJ6 1188 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 AMZ2Q86W34 360 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 OR2T34Q8NGX1 318 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RHBDD1Q8TEB9 315 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 CHURC1Q8WUH1 139 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 KCNE4Q8WWG9 221 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RSC1A1Q92681 617 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RGMAQ96B86 450 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 EAF2Q96CJ1 260 aaPredicted RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 THOC1Q96FV9 657 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 NEU1Q99519 415 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 CACNG6Q9BXT2 260 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 GPR61Q9BZJ8 451 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 TRIM31Q9BZY9 425 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 PSTPIP2Q9H939 334 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 SMURF1Q9HCE7 757 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 FAM114A2Q9NRY5 505 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 LMBRD1Q9NUN5 540 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 POLR3BQ9NW08 1133 aaPredicted RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 ARHGAP20Q9P2F6 1191 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 KIAA1257Q9ULG3 409 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 MINPP1Q9UNW1 487 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 DMRT1Q9Y5R6 373 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 TRPV2Q9Y5S1 764 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 SALL3Q9BXA9 1300 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 LIPT2A6NK58 231 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 OR5K4A6NMS3 321 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 TTC34A8MYJ7 566 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 ST8SIA5O15466 376 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 EXTL3O43909 919 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 IDH1O75874 414 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 FLOT1O75955 427 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 KRT14P02533 472 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 LIPFP07098 398 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 ASNSP08243 561 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 BRAFP15056 766 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 AXLP30530 894 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 PRKAR2BP31323 418 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 EVI2BP34910 448 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 SOX18P35713 384 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 GPR68Q15743 365 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 TWISTNBQ3B726 338 aaPredicted RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 MDH1BQ5I0G3 518 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RNASEH2BQ5TBB1 312 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 ANGEL2Q5VTE6 544 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 ANO7Q6IWH7 933 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 CPLX4Q7Z7G2 160 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 HOOK3Q86VS8 718 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 CCDC103Q8IW40 242 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RHOT2Q8IXI1 618 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 ADGRF2Q8IZF7 708 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 OR6J1Q8NGC5 347 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 CPT1CQ8TCG5 803 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 SCFD2Q8WU76 684 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 CACTINQ8WUQ7 758 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 SLC41A2Q96JW4 573 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 GBP5Q96PP8 586 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 FAM118BQ9BPY3 351 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 TP63Q9H3D4 680 aaPredicted RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 CCDC86Q9H6F5 360 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 SMURF2Q9HAU4 748 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 MAGEB16A2A368 324 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 ZNF879B4DU55 563 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 H0Y858 1186 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RRP8O43159 456 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 FKTNO75072 461 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 REC8O95072 547 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 ZFYP08048 801 aaPredicted RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 SNRPB2P08579 225 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 RPSAP08865 295 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 KITP10721 976 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 SLC7A1P30825 629 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 STARP49675 285 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RWDD2BP57060 319 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RPS16P62249 146 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 DR1Q01658 176 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 THOC5Q13769 683 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 DDX39BQ13838 428 aaKnown RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 KLHL17Q6TDP4 642 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 RHOUQ7L0Q8 258 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 DENND6AQ8IWF6 608 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 BCL2L2Q92843 193 aaPredicted RBP4.1□□□□□ -1.75
UBR3-206ENST00000444475 RTKNQ9BST9 563 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 APOL6Q9BWW8 343 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 IRX2Q9BZI1 471 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms