RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 NCAPGQ9BPX3 1015 aa14.05□□□□□ -0.16
TM9SF4-204ENST00000442842 LINC00597Q9H2U6 94 aa14.05□□□□□ -0.16
TM9SF4-204ENST00000442842 EBF3Q9H4W6 596 aa14.05□□□□□ -0.16
TM9SF4-204ENST00000442842 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.05□□□□□ -0.16
TM9SF4-204ENST00000442842 IGSF9Q9P2J2 1179 aa14.05□□□□□ -0.16
TM9SF4-204ENST00000442842 TBC1D14Q9P2M4 693 aa14.05□□□□□ -0.16
TM9SF4-204ENST00000442842 FZD10Q9ULW2 581 aa14.05□□□□□ -0.16
TM9SF4-204ENST00000442842 DOCK6Q96HP0 2047 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 F5H5T6 163 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 SLC9A3R1O14745 358 aaPredicted RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 NARSO43776 548 aaKnown RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 NFATC1O95644 943 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 IL1R2P27930 398 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 SLC6A4P31645 630 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 ADRA1BP35368 520 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 SLC1A1P43005 524 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 DNA2P51530 1060 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 PDGFRLQ15198 375 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 CA9Q16790 459 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 EML3Q32P44 896 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 FAM133BQ5BKY9 247 aaKnown RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 TJAP1Q5JTD0 557 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 ZNF662Q6ZS27 426 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 CIR1Q86X95 450 aaPredicted RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 SYCE1Q8N0S2 351 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 LGI2Q8N0V4 545 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 PYROXD2Q8N2H3 581 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 RNF10Q8N5U6 811 aaKnown RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 ATP2A3Q93084 1043 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 NXPE3Q969Y0 559 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 PRICKLE1Q96MT3 831 aaPredicted RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 RPRD1AQ96P16 312 aaPredicted RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 NECAB3Q96P71 396 aaPredicted RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 DDX50Q9BQ39 737 aaKnown RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 DHX35Q9H5Z1 703 aaKnown RBP14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 TMEM51Q9NW97 253 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 ALG6Q9Y672 507 aa14.04□□□□□ -0.16
TM9SF4-204ENST00000442842 DENND4CQ5VZ89 1909 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 CHADO15335 359 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 CREB3O43889 395 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 SRGAP2O75044 1071 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 KRT1P04264 644 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 CYP17A1P05093 508 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 RARAP10276 462 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 SGSHP51688 502 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 SCAPQ12770 1279 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 MTA1Q13330 715 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 TDGQ13569 410 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 AUHQ13825 339 aaKnown RBP14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 KRT81Q14533 505 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 ANO4Q32M45 955 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 PPP6R3Q5H9R7 873 aaPredicted RBP14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 LY6G5CQ5SRR4 150 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 ADGRF1Q5T601 910 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 ERMARDQ5T6L9 678 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 CYP4V2Q6ZWL3 525 aaPredicted RBP14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 PEX26Q7Z412 305 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 C14orf80Q86SX3 495 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 RHOT1Q8IXI2 618 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 SLC44A3Q8N4M1 653 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 CPA6Q8N4T0 437 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 LRRC57Q8N9N7 239 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 KIAA1524Q8TCG1 905 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 CSGALNACT1Q8TDX6 532 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 DDI1Q8WTU0 396 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 MYEOVQ96EZ4 313 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 HAPLN3Q96S86 360 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 KCTD15Q96SI1 283 aaPredicted RBP14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 MAGEB5Q9BZ81 275 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 IRX2Q9BZI1 471 aaPredicted RBP14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 SPHK2Q9NRA0 654 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 STIM2Q9P246 746 aa14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 PACSIN2Q9UNF0 486 aaPredicted RBP14.03□□□□□ -0.16
TM9SF4-204ENST00000442842 TYW5A2RUC4 315 aaKnown RBP14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 GOLGA6L9A6NEM1 432 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 C19orf67A6NJJ6 358 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 E9PAM4 449 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 NEDD8-MDP1E9PL57 170 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 FAM72CH0Y354 149 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 KIF5CO60282 957 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 CYBBP04839 570 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 KRT7P08729 469 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 CHKAP35790 457 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 AIF1P55008 147 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 RUNX3Q13761 415 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 HS1BP3Q53T59 392 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 ODF2Q5BJF6 829 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 RABGAP1LQ5R372 815 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 FAM72AQ5TYM5 149 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 FAM72DQ6L9T8 149 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 RWDD4Q6NW29 188 aaKnown RBP14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 FAM72BQ86X60 149 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 TMEM25Q86YD3 366 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 RNF135Q8IUD6 432 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 CFAP52Q8N1V2 620 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 CPXM2Q8N436 756 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 IRF7Q92985 503 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 AZIN2Q96A70 460 aa14.02□□□□□ -0.17
TM9SF4-204ENST00000442842 OTUB2Q96DC9 234 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms