RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 HOXD9P28356 352 aaPredicted RBP15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 SLC6A4P31645 630 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 PTPN9P43378 593 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 CXCL12P48061 93 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 DEUP1Q05D60 604 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 KDSRQ06136 332 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 NME3Q13232 169 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 E2F5Q15329 346 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 MS4A13Q5J8X5 152 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 NADSYN1Q6IA69 706 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 TRNP1Q6NT89 227 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 Q6ZS52 159 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 HJURPQ8NCD3 748 aaPredicted RBP15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 USP33Q8TEY7 942 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 RNF34Q969K3 372 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 ACDQ96AP0 544 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 TRIM11Q96F44 468 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 TBCBQ99426 244 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 DNAJC7Q99615 494 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 FAM126AQ9BYI3 521 aaPredicted RBP15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 ISCUQ9H1K1 167 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 WDCPQ9H6R7 721 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 PIGVQ9NUD9 493 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 ARHGEF38Q9NXL2 777 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 SYNJ2BP-COX16A0A087WUM0 186 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 GOLGA6L7A0A1B0GV03 622 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 ANKRD62A6NC57 917 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 MOCS2O96007 188 aaPredicted RBP15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 MYBL1P10243 752 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 TACR2P21452 398 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 SDC4P31431 198 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 RDXP35241 583 aaKnown RBP15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 MESP2Q0VG99 397 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 DNAJC24Q6P3W2 148 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 RFWD3Q6PCD5 774 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 STRADAQ7RTN6 431 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 GAS2L3Q86XJ1 694 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 MAML2Q8IZL2 1156 aaPredicted RBP15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 RXFP2Q8WXD0 754 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 BHMTQ93088 406 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 P2RY11Q96G91 374 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 CFAP57Q96MR6 1250 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 PRMT1Q99873 361 aaKnown RBP15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 ADAM33Q9BZ11 813 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 TAS2R14Q9NYV8 317 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 COX16Q9P0S2 106 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 CALCOCO1Q9P1Z2 691 aa15.58■□□□□ 0.08
CSNK1E-210ENST00000442216 FAM170AA1A519 330 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 F5H5T6 163 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 AP5Z1O43299 807 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 TSPAN3O60637 253 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 FTLP02792 175 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 CHRM1P11229 460 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 TFE3P19532 575 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 RRM1P23921 792 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 HOXA6P31267 233 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 RFC1P35251 1148 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 KIR2DL1P43626 348 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 NRLP54845 237 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 TSR1Q2NL82 804 aaKnown RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 CCDC14Q49A88 953 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 PPP1R15BQ5SWA1 713 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 C10orf76Q5T2E6 689 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 TTC39BQ5VTQ0 682 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 PLEKHA7Q6IQ23 1121 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 WDR59Q6PJI9 974 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 SYT13Q7L8C5 426 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 TRMT11Q7Z4G4 463 aaKnown RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 CHSY1Q86X52 802 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 CNGA4Q8IV77 575 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 EMC1Q8N766 993 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 RPLP0P6Q8NHW5 317 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 JOSD2Q8TAC2 188 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 CENPIQ92674 756 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 NELL1Q92832 810 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 MRFAP1L1Q96HT8 127 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 C1orf74Q96LT6 269 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 PARVAQ9NVD7 372 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 ZNHIT6Q9NWK9 470 aaKnown RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 ARHGAP20Q9P2F6 1191 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 ADAMTS1Q9UHI8 967 aa15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 XPO7Q9UIA9 1087 aaKnown RBP15.57■□□□□ 0.08
CSNK1E-210ENST00000442216 SSU72P8A0A1W2PR75 194 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 TMCO5BA8MYB1 307 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 H0Y858 1186 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 NPC1O15118 1278 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 TRIM24O15164 1050 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 TIMM44O43615 452 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 TBL1XO60907 577 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 MFAP3LO75121 409 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 SP9P0CG40 484 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 TDGF1P13385 188 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 DESP17661 470 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 GPD1P21695 349 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 SATB1Q01826 763 aa15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 CSTF1Q05048 431 aaKnown RBP15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 TBX2Q13207 712 aaPredicted RBP15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
CSNK1E-210ENST00000442216 EIF4HQ15056 248 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms