RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 INHBCP55103 352 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 MMRN1Q13201 1228 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 MYBPC3Q14896 1274 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 ARL13BQ3SXY8 428 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 EFHC2Q5JST6 749 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 CYB5D1Q6P9G0 228 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 CCDC13Q8IYE1 715 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 STKLD1Q8NE28 680 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 CLP1Q92989 425 aaKnown RBP8.37□□□□□ -1.07
CCDC39-201ENST00000442201 FBXO32Q969P5 355 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 NTAN1Q96AB6 310 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 RNF157Q96PX1 679 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 COMMD8Q9NX08 183 aa8.37□□□□□ -1.07
CCDC39-201ENST00000442201 TPX2Q9ULW0 747 aaKnown RBP8.37□□□□□ -1.07
CCDC39-201ENST00000442201 A0A1W2PQH9 124 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 FAM92AA1XBS5 289 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 ABLIM3O94929 683 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 ATF2P15336 505 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 TNFRSF8P28908 595 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 L1CAMP32004 1257 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 ADRA1BP35368 520 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 ARL4AP40617 200 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 PTGIRP43119 386 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 USP46P62068 366 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 LMNB2Q03252 620 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 RAB33AQ14088 237 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 PPP1R7Q15435 360 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 DRICH1Q6PGQ1 229 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-201ENST00000442201 TAC4Q86UU9 113 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 BCAS4Q8TDM0 211 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 IFT81Q8WYA0 676 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 DPF3Q92784 378 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 SLCO2A1Q92959 643 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 HAUS1Q96CS2 278 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 FAM118BQ9BPY3 351 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 ERP44Q9BS26 406 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 TRIM51Q9BSJ1 452 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 FRMD8P1Q9BZ68 369 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-201ENST00000442201 ACTR5Q9H9F9 607 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-201ENST00000442201 NMUR1Q9HB89 426 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 WDR6Q9NNW5 1121 aaKnown RBP8.36□□□□□ -1.07
CCDC39-201ENST00000442201 HSFX1Q9UBD0 423 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 FBXW11Q9UKB1 542 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 FZD10Q9ULW2 581 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 SSX2IPQ9Y2D8 614 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 VWA8A3KMH1 1905 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 APOC4-APOC2K7ER74 178 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 LIASO43766 372 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 KIAA0754O94854 1291 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 APOC2P02655 101 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 IL4RP24394 825 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 CXCR3P49682 368 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 SKOR1P84550 965 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 CREMQ03060 361 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 CUL1Q13616 776 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 BLMHQ13867 455 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 BYSLQ13895 437 aaKnown RBP8.36□□□□□ -1.07
CCDC39-201ENST00000442201 LRRC23Q53EV4 343 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-201ENST00000442201 ANKRD20A8PQ5CZ79 823 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 SYDE1Q6ZW31 735 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-201ENST00000442201 MICALCLQ6ZW33 695 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 ACTL9Q8TC94 416 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 SP7Q8TDD2 431 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-201ENST00000442201 GIPC2Q8TF65 315 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 CASKIN2Q8WXE0 1202 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 AUTS2Q8WXX7 1259 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 RNF34Q969K3 372 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 WDCPQ9H6R7 721 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 CYP4F11Q9HBI6 524 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 SPATA7Q9P0W8 599 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 GMIPQ9P107 970 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 ZNF148Q9UQR1 794 aa8.36□□□□□ -1.07
CCDC39-201ENST00000442201 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-201ENST00000442201 LINC00271P0C7V0 271 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 CTSAP10619 480 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 ATF6P18850 670 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 CARSP49589 748 aaKnown RBP8.35□□□□□ -1.07
CCDC39-201ENST00000442201 OTUD4Q01804 1114 aaKnown RBP8.35□□□□□ -1.07
CCDC39-201ENST00000442201 TAF10Q12962 218 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 HLTFQ14527 1009 aaKnown RBP eCLIP8.35□□□□□ -1.07
CCDC39-201ENST00000442201 CCDC38Q502W7 563 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 EIF1ADQ8N9N8 165 aaKnown RBP8.35□□□□□ -1.07
CCDC39-201ENST00000442201 NKD2Q969F2 451 aaPredicted RBP8.35□□□□□ -1.07
CCDC39-201ENST00000442201 KCTD15Q96SI1 283 aaPredicted RBP8.35□□□□□ -1.07
CCDC39-201ENST00000442201 TRIM31Q9BZY9 425 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 DPH5Q9H2P9 285 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 SMOC2Q9H3U7 446 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 TMEM165Q9HC07 324 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 TLR8Q9NR97 1041 aaKnown RBP8.35□□□□□ -1.07
CCDC39-201ENST00000442201 FAM114A2Q9NRY5 505 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 MTMR10Q9NXD2 777 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 CLIC5Q9NZA1 410 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 FNIP2Q9P278 1114 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 RCOR3Q9P2K3 495 aaPredicted RBP8.35□□□□□ -1.07
CCDC39-201ENST00000442201 DNPEPQ9ULA0 475 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 TMEM221A6NGB7 291 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 SLC38A8A6NNN8 435 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 H3BRJ5 948 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 APOL1O14791 398 aa8.35□□□□□ -1.07
CCDC39-201ENST00000442201 IRAK2O43187 625 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms