RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CYP4F11Q9HBI6 524 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 XPNPEP1Q9NQW7 623 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 AP4B1Q9Y6B7 739 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 STYXL1Q9Y6J8 313 aa12.26□□□□□ -0.45
LTBR-203ENST00000441074 PTPRFP10586 1907 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 MAGEB3O15480 346 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 FAM58BPP0C7Q3 252 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 CDH2P19022 906 aaPredicted RBP12.25□□□□□ -0.45
LTBR-203ENST00000441074 EDNRBP24530 442 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 PRKCHP24723 683 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 COG7P83436 770 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 NOGQ13253 232 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 SLC44A4Q53GD3 710 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 TCHHL1Q5QJ38 904 aaPredicted RBP12.25□□□□□ -0.45
LTBR-203ENST00000441074 TMEM270Q6UE05 265 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 FAM71DQ8N9W8 422 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 PPP1R13LQ8WUF5 828 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 ZNF778Q96MU6 729 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 FAM96AQ9H5X1 160 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 PDLIM7Q9NR12 457 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 CYP26B1Q9NR63 512 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 PCDHGB4Q9UN71 923 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 PCDHGB5Q9Y5G0 923 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 CXorf49A8MYA2 514 aaPredicted RBP12.25□□□□□ -0.45
LTBR-203ENST00000441074 H3BSA7 217 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 ADCY3O60266 1144 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 KRT38O76015 456 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 SUPT20HL2P0C7V6 817 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 IDO1P14902 403 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 PRDX6P30041 224 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 TCF7P36402 384 aaPredicted RBP12.25□□□□□ -0.45
LTBR-203ENST00000441074 PHEXP78562 749 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 KCNJ11Q14654 390 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 TAZQ16635 292 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 RARS2Q5T160 578 aaKnown RBP12.25□□□□□ -0.45
LTBR-203ENST00000441074 SLFN12LQ6IEE8 588 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 LRRC8BQ6P9F7 803 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 Q6ZNX1 250 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 THNSL1Q8IYQ7 743 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 TFB1MQ8WVM0 346 aaKnown RBP12.25□□□□□ -0.45
LTBR-203ENST00000441074 PRPF31Q8WWY3 499 aaKnown RBP12.25□□□□□ -0.45
LTBR-203ENST00000441074 CFAP36Q96G28 342 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 CNBD2Q96M20 576 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 PRPF18Q99633 342 aaKnown RBP12.25□□□□□ -0.45
LTBR-203ENST00000441074 ZNF302Q9NR11 478 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 DNAJC16Q9Y2G8 782 aa12.25□□□□□ -0.45
LTBR-203ENST00000441074 FBXO21O94952 628 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 VNN1O95497 513 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 LDHAP00338 332 aaKnown RBP12.24□□□□□ -0.45
LTBR-203ENST00000441074 PIGRP01833 764 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 VARSP26640 1264 aaKnown RBP12.24□□□□□ -0.45
LTBR-203ENST00000441074 ADORA2AP29274 412 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 HSPA13P48723 471 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 TEDDM1Q5T9Z0 273 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 SPOPLQ6IQ16 392 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 IYDQ6PHW0 289 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 ZCCHC23Q6ZST2 131 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 TAS1R3Q7RTX0 852 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 TICAM1Q8IUC6 712 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 NDUFAF2Q8N183 169 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 SMYD1Q8NB12 490 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 GPRC5AQ8NFJ5 357 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 ADCY4Q8NFM4 1077 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 PPP1R14CQ8TAE6 165 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 HSPBAP1Q96EW2 488 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 CDHR1Q96JP9 859 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 LRGUKQ96M69 825 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 CGRRF1Q99675 332 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 DNAJC28Q9NX36 388 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 ZNHIT2Q9UHR6 403 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 APPL1Q9UKG1 709 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 AGO2Q9UKV8 859 aaKnown RBP12.24□□□□□ -0.45
LTBR-203ENST00000441074 DOCK5Q9H7D0 1870 aa12.24□□□□□ -0.45
LTBR-203ENST00000441074 DNAJC25-GNG10A0A024R161 153 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 MANSC4A6NHS7 340 aaPredicted RBP12.23□□□□□ -0.45
LTBR-203ENST00000441074 CHADO15335 359 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 SUPT3HO75486 399 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 TOM1L1O75674 476 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 SLC25A27O95847 323 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 EIF3EP60228 445 aaKnown RBP12.23□□□□□ -0.45
LTBR-203ENST00000441074 ADGRE1Q14246 886 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 FASTKD1Q53R41 847 aaKnown RBP12.23□□□□□ -0.45
LTBR-203ENST00000441074 STXBP5Q5T5C0 1151 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 DHRS4L2Q6PKH6 230 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 TRAPPC12Q8WVT3 735 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 FRMD8Q9BZ67 464 aaPredicted RBP12.23□□□□□ -0.45
LTBR-203ENST00000441074 ZNF518BQ9C0D4 1074 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 POLR3FQ9H1D9 316 aaPredicted RBP12.23□□□□□ -0.45
LTBR-203ENST00000441074 APOBEC3GQ9HC16 384 aaKnown RBP12.23□□□□□ -0.45
LTBR-203ENST00000441074 RBAKQ9NYW8 714 aaPredicted RBP12.23□□□□□ -0.45
LTBR-203ENST00000441074 TUBGCP4Q9UGJ1 667 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 RSL24D1Q9UHA3 163 aaKnown RBP12.23□□□□□ -0.45
LTBR-203ENST00000441074 ARHGAP26Q9UNA1 814 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 MYH9P35579 1960 aaKnown RBP12.23□□□□□ -0.45
LTBR-203ENST00000441074 SH3PXD2BA1X283 911 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 ITM2AO43736 263 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 GJB1P08034 283 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 KRT7P08729 469 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 KDELR1P24390 212 aa12.23□□□□□ -0.45
LTBR-203ENST00000441074 IDH3AP50213 366 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms