RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 LIMK1P53667 647 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 SNX16P57768 344 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 NNTQ13423 1086 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 ZNF234Q14588 700 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 CHST9Q7L1S5 443 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 CACUL1Q86Y37 369 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 MFN1Q8IWA4 741 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 AHI1Q8N157 1196 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 DEFB119Q8N690 84 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 MRGPRX1Q96LB2 322 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 SLC6A17Q9H1V8 727 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 PRDM16Q9HAZ2 1276 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 RXFP3Q9NSD7 469 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 LMBRD1Q9NUN5 540 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 GGA2Q9UJY4 613 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 PLA2G4CQ9UP65 541 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 GOLGA6L7A0A1B0GV03 622 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 PABPC1P11940 636 aaKnown RBP20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 EEF1GP26641 437 aaKnown RBP20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 HLA-FP30511 346 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 RPL34P49207 117 aaKnown RBP20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 YWHAZP63104 245 aaKnown RBP20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 CDH18Q13634 790 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 FUT11Q495W5 492 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 PPM1JQ5JR12 505 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 SPDYCQ5MJ68 293 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 TMEM110Q86TL2 294 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 C1orf131Q8NDD1 294 aaKnown RBP20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 PPP1R13BQ96KQ4 1090 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 FCRL2Q96LA5 508 aaPredicted RBP20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 TJP2Q9UDY2 1190 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 CYTH4Q9UIA0 394 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 NFE2L3Q9Y4A8 694 aa20.62■□□□□ 0.89
SHROOM1-204ENST00000440118 SYNJ2BP-COX16A0A087WUM0 186 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 IGHV1OR15-9A0A0B4J2B8 117 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 LNP1A1A4G5 178 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 CFIP05156 583 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 FYNP06241 537 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 ACADMP11310 421 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 SLC6A4P31645 630 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 SGSHP51688 502 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 BPIFB4P59827 614 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 DCAF6Q58WW2 860 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 FAM133BQ5BKY9 247 aaKnown RBP20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 TRIM61Q5EBN2 209 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 CT47A1Q5JQC4 288 aaPredicted RBP20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 PIK3R6Q5UE93 754 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 CLEC17AQ6ZS10 378 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 BEND5Q7L4P6 421 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 CHSY1Q86X52 802 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 SYT12Q8IV01 421 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 CYB5D2Q8WUJ1 264 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 PRCCQ92733 491 aaPredicted RBP20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 RNF34Q969K3 372 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 AZIN2Q96A70 460 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 LSM14BQ9BX40 385 aaKnown RBP20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 NUSAP1Q9BXS6 441 aaKnown RBP20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 IRX2Q9BZI1 471 aaPredicted RBP20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 SIX2Q9NPC8 291 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 SAMSN1Q9NSI8 373 aaKnown RBP20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 COX16Q9P0S2 106 aa20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 AJAP1Q9UKB5 411 aaPredicted RBP20.61■□□□□ 0.89
SHROOM1-204ENST00000440118 PATE3B3GLJ2 98 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 HSF2BPO75031 334 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 TRUB2O95900 331 aaKnown RBP20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 ATP5BP06576 529 aaKnown RBP20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 PNMA6AP0CW24 399 aaPredicted RBP20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 POLR2EP19388 210 aaKnown RBP20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 PRKCHP24723 683 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 CDK17Q00537 523 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 TCP11X2Q5H9J9 407 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 MIIPQ5JXC2 388 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 MPP7Q5T2T1 576 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 SYPL2Q5VXT5 272 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 OR6B2Q6IFH4 312 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 SLC47A2Q86VL8 602 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 CARNMT1Q8N4J0 409 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 HSPA12BQ96MM6 686 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 CPXM1Q96SM3 734 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 NUCKS1Q9H1E3 243 aaKnown RBP20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 TMEM9BQ9NQ34 198 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 TAB2Q9NYJ8 693 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 SLC12A6Q9UHW9 1150 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 PCDHGC3Q9UN70 934 aa20.6■□□□□ 0.89
SHROOM1-204ENST00000440118 MUC22E2RYF6 1773 aaPredicted RBP20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 FOXN3O00409 490 aaPredicted RBP20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 HLA-EP13747 358 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 ITPKAP23677 461 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 ZNF33AQ06730 810 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 LMAN2Q12907 356 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 ZC3H12AQ5D1E8 599 aaKnown RBP20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 EFHC1Q5JVL4 640 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 DAB2IPQ5VWQ8 1189 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 TMEM215Q68D42 235 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 MBLAC2Q68D91 279 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 NADSYN1Q6IA69 706 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 SASS6Q6UVJ0 657 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 C11orf57Q6ZUT1 292 aaPredicted RBP20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 TMPRSS6Q8IU80 811 aa20.59■□□□□ 0.89
SHROOM1-204ENST00000440118 RGL4Q8IZJ4 473 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms