RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 NNTQ13423 1086 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 CLEC16AQ2KHT3 1053 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 PKN3Q6P5Z2 889 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 PHLDB2Q86SQ0 1253 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 LONP2Q86WA8 852 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 TMTC1Q8IUR5 882 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 TMEM139Q8IV31 216 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 NUP205Q92621 2012 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 RMDN1Q96DB5 314 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 PNKPQ96T60 521 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 DNAJC17Q9NVM6 304 aaKnown RBP18.37■□□□□ 0.53
CCDC188-201ENST00000439765 C2orf42Q9NWW7 574 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 DDIT4Q9NX09 232 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 MARK1Q9P0L2 795 aa18.37■□□□□ 0.53
CCDC188-201ENST00000439765 CNOT1A5YKK6 2376 aaKnown RBP18.36■□□□□ 0.53
CCDC188-201ENST00000439765 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-201ENST00000439765 TRIM24O15164 1050 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 CACNG3O60359 315 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 KAT7O95251 611 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 PLEKP08567 350 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-201ENST00000439765 EIF2DP41214 584 aaKnown RBP18.36■□□□□ 0.53
CCDC188-201ENST00000439765 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-201ENST00000439765 TDRD12Q587J7 1177 aaKnown RBP18.36■□□□□ 0.53
CCDC188-201ENST00000439765 ZNF571Q7Z3V5 609 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-201ENST00000439765 UNC45BQ8IWX7 931 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 FAM217AQ8IXS0 508 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 CPXM2Q8N436 756 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 CCDC112Q8NEF3 446 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 SYT11Q9BT88 431 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 METTL5Q9NRN9 209 aaKnown RBP18.36■□□□□ 0.53
CCDC188-201ENST00000439765 WDR35Q9P2L0 1181 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 DNAH14Q0VDD8 3507 aa18.36■□□□□ 0.53
CCDC188-201ENST00000439765 SSU72P8A0A1W2PR75 194 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 ANTXRLA6NF34 631 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 CHURC1-FNTBB4DL54 471 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 TSPAN3O60637 253 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 APOEP02649 317 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 APODP05090 189 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 MATKP42679 507 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 SLC11A2P49281 568 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 FNTBP49356 437 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 DMWDQ09019 674 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 NME3Q13232 169 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 FBXO43Q4G163 708 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 ZC3H12AQ5D1E8 599 aaKnown RBP18.35■□□□□ 0.53
CCDC188-201ENST00000439765 FYB2Q5VWT5 728 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 LAIR1Q6GTX8 287 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 PHTF2Q8N3S3 785 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 RPLP0P6Q8NHW5 317 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 SLC39A13Q96H72 371 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 XPO6Q96QU8 1125 aaKnown RBP18.35■□□□□ 0.53
CCDC188-201ENST00000439765 NHEJ1Q9H9Q4 299 aaPredicted RBP18.35■□□□□ 0.53
CCDC188-201ENST00000439765 DEC1Q9P2X7 70 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 GMEB2Q9UKD1 530 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 RAB23Q9ULC3 237 aa18.35■□□□□ 0.53
CCDC188-201ENST00000439765 GOLGA6L7A0A1B0GV03 622 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 K7EQS6 105 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 ATG13O75143 517 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 LATS1O95835 1130 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 PENKP01210 267 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-201ENST00000439765 CYBBP04839 570 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 TFE3P19532 575 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-201ENST00000439765 TNFAIP3P21580 790 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 TGM1P22735 817 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 SLC6A4P31645 630 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 NOS2P35228 1153 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 FLT3P36888 993 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 SCNN1AP37088 669 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 EIF4A3P38919 411 aaKnown RBP18.34■□□□□ 0.53
CCDC188-201ENST00000439765 SGSHP51688 502 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 CCZ1BP86790 482 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 CCZ1P86791 482 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-201ENST00000439765 FAM133BQ5BKY9 247 aaKnown RBP18.34■□□□□ 0.53
CCDC188-201ENST00000439765 ADGRF1Q5T601 910 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 OTUD1Q5VV17 481 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-201ENST00000439765 NADSYN1Q6IA69 706 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 GRAMD4Q6IC98 578 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 RFWD3Q6PCD5 774 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 TERB1Q8NA31 727 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 OLIG1Q8TAK6 271 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 DDI1Q8WTU0 396 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 ZNF830Q96NB3 372 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-201ENST00000439765 ADAM33Q9BZ11 813 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 DLL3Q9NYJ7 618 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCDC188-201ENST00000439765 ADAM22Q9P0K1 906 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 CALCOCO1Q9P1Z2 691 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 XPO7Q9UIA9 1087 aaKnown RBP18.34■□□□□ 0.53
CCDC188-201ENST00000439765 STOML2Q9UJZ1 356 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 ABCA7Q8IZY2 2146 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 NCOR2Q9Y618 2525 aa18.34■□□□□ 0.53
CCDC188-201ENST00000439765 CCDC163A0A0D9SF12 145 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 M0QYT0 321 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 HRO43593 1189 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 NRDCO43847 1150 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 ACSL4O60488 711 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 GJB6O95452 261 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 GRIA2P42262 883 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 SULT1E1P49888 294 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 PTP4A2Q12974 167 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms