RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CELA2AP08217 269 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 GYS1P13807 737 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 CERS1P27544 350 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 NDUFS1P28331 727 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 PNLIPRP1P54315 467 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 TLE3Q04726 772 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 SRSF4Q08170 494 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 SLC14A1Q13336 389 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 PFKFB3Q16875 520 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 TBRG1Q3YBR2 411 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 GLE1Q53GS7 698 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 KIAA1614Q5VZ46 1190 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 ANKRD40Q6AI12 368 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 WDR93Q6P2C0 686 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 ZNF813Q6ZN06 617 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 LAS2Q8IYD9 372 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 GALNT15Q8N3T1 639 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 C8orf58Q8NAV2 365 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 ZNF398Q8TD17 642 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 PNISRQ8TF01 805 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 HMGB4Q8WW32 186 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 ASB12Q8WXK4 309 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 CPT1BQ92523 772 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 SENP7Q9BQF6 1050 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 DDX23Q9BUQ8 820 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 SORBS1Q9BX66 1292 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 NUAK2Q9H093 628 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 BRD8Q9H0E9 1235 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 ELAC1Q9H777 363 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 SAYSD1Q9NPB0 183 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 LIN7CQ9NUP9 197 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 NDUFAF4Q9P032 175 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 DAPP1Q9UN19 280 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 COL3A1P02461 1466 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 HMX3A6NHT5 357 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 MBD3L5A6NJ08 208 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 C3orf70A6NLC5 250 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 SLC38A8A6NNN8 435 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 TUBB4AP04350 444 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 PAX3P23760 479 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 CST5P28325 142 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 HOXD12P35452 270 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 RBM6P78332 1123 aaKnown RBP4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 BIRC3Q13489 604 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 AWAT1Q58HT5 328 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 CEP78Q5JTW2 689 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 TTC22Q5TAA0 569 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 KYAT3Q6YP21 454 aaKnown RBP4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 LDHAL6AQ6ZMR3 332 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 SMAP1Q8IYB5 467 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 ADPRHL1Q8NDY3 354 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 SRFBP1Q8NEF9 429 aaKnown RBP4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 SCAMP5Q8TAC9 235 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 RUBCNQ92622 972 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 EVI5LQ96CN4 794 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 MCRS1Q96EZ8 462 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 ISCA1Q9BUE6 129 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 ELOVL1Q9BW60 279 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 VPS16Q9H269 839 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 MLXIPQ9HAP2 919 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 TMLHEQ9NVH6 421 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 ARL8BQ9NVJ2 186 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 ASNSD1Q9NWL6 643 aa4.16□□□□□ -1.74
TRAPPC13-204ENST00000438419 M0QYT0 321 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 IPO5O00410 1097 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 PRYO14603 147 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 IRAK2O43187 625 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 USP12O75317 370 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 ALDOAP04075 364 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 CYP3A4P08684 503 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 CYP2D6P10635 497 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 TACR3P29371 465 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 MPGP29372 298 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 GRK5P34947 590 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 VPS41P49754 854 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 TAS2R50P59544 299 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 RPL15P61313 204 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 KPNB1Q14974 876 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 POSTNQ15063 836 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 RPS6KA2Q15349 733 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 TIGD6Q17RP2 521 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 TMEM95Q3KNT9 176 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 JMJD6Q6NYC1 403 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 TMEM88Q6PEY1 159 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 C3orf49Q96BT1 292 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 ZNF845Q96IR2 970 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 C5orf34Q96MH7 638 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 TRAPPC9Q96Q05 1148 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 SH2D3AQ9BRG2 576 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 EFHD1Q9BUP0 239 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 QTRT1Q9BXR0 403 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 TRIM2Q9C040 744 aa4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 SRP68Q9UHB9 627 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 HEMK1Q9Y5R4 338 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC13-204ENST00000438419 TBC1D3DA0A087WVF3 549 aa4.14□□□□□ -1.75
TRAPPC13-204ENST00000438419 TBC1D3IA0A087WXS9 549 aa4.14□□□□□ -1.75
TRAPPC13-204ENST00000438419 TBC1D3EA0A087X179 549 aa4.14□□□□□ -1.75
TRAPPC13-204ENST00000438419 TBC1D3KA0A087X1G2 549 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms