RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 PUM1Q14671 1186 aaKnown RBP eCLIP19.01■□□□□ 0.631e-6■□□□□ 9.6
HMGN1-207ENST00000436324 PTPN20Q4JDL3 420 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 AASDHQ4L235 1098 aaPredicted RBP19.01■□□□□ 0.63
HMGN1-207ENST00000436324 EFHC1Q5JVL4 640 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 FKBP15Q5T1M5 1219 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 PMS2CLQ68D20 193 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 CHST9Q7L1S5 443 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 BEND5Q7L4P6 421 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 ARMCX6Q7L4S7 300 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 TMEFF1Q8IYR6 380 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 DEFB119Q8N690 84 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 C12orf50Q8NA57 414 aaPredicted RBP19.01■□□□□ 0.63
HMGN1-207ENST00000436324 WFDC5Q8TCV5 224 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 AZIN2Q96A70 460 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 DDX50Q9BQ39 737 aaKnown RBP19.01■□□□□ 0.63
HMGN1-207ENST00000436324 STK33Q9BYT3 514 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 NUCKS1Q9H1E3 243 aaKnown RBP19.01■□□□□ 0.63
HMGN1-207ENST00000436324 FAM204AQ9H8W3 233 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 FAM207AQ9NSI2 230 aaPredicted RBP19.01■□□□□ 0.63
HMGN1-207ENST00000436324 TMEM63CQ9P1W3 806 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 PCDHGA5Q9Y5G8 931 aa19.01■□□□□ 0.63
HMGN1-207ENST00000436324 IRAK2O43187 625 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 CAVIN2O95810 425 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 ZNF806P0C7X5 589 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 CDK11BP21127 795 aaKnown RBP19■□□□□ 0.63
HMGN1-207ENST00000436324 POLR2FP61218 127 aaKnown RBP19■□□□□ 0.63
HMGN1-207ENST00000436324 RPS24P62847 133 aaKnown RBP19■□□□□ 0.63
HMGN1-207ENST00000436324 CDK17Q00537 523 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 TYRO3Q06418 890 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 BYSLQ13895 437 aaKnown RBP19■□□□□ 0.63
HMGN1-207ENST00000436324 STARD3Q14849 445 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 TCEAL6Q6IPX3 200 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 KIAA1324Q6UXG2 1013 aaKnown RBP19■□□□□ 0.63
HMGN1-207ENST00000436324 DGLUCYQ7Z3D6 616 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 NOP9Q86U38 636 aaKnown RBP19■□□□□ 0.63
HMGN1-207ENST00000436324 CFAP52Q8N1V2 620 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 TMEM35BQ8NCS4 154 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 CYB5D2Q8WUJ1 264 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 TCEAL3Q969E4 200 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 RNF34Q969K3 372 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 PCMTD1Q96MG8 357 aaPredicted RBP19■□□□□ 0.63
HMGN1-207ENST00000436324 PRICKLE1Q96MT3 831 aaPredicted RBP19■□□□□ 0.63
HMGN1-207ENST00000436324 GANQ9H2C0 597 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 CD248Q9HCU0 757 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 NLRC4Q9NPP4 1024 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 DLL3Q9NYJ7 618 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 GGA2Q9UJY4 613 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 CYP8B1Q9UNU6 501 aa19■□□□□ 0.63
HMGN1-207ENST00000436324 CFAP54Q96N23 3096 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 BCLAF3A2AJT9 711 aaKnown RBP18.99■□□□□ 0.63
HMGN1-207ENST00000436324 F8VZ95 297 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 TIMM44O43615 452 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 SYNCRIPO60506 623 aaKnown RBP18.99■□□□□ 0.63
HMGN1-207ENST00000436324 HSF2BPO75031 334 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 GFPT2O94808 682 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 GLI1P08151 1106 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 PABPC1P11940 636 aaKnown RBP18.99■□□□□ 0.63
HMGN1-207ENST00000436324 HLA-EP13747 358 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 CD70P32970 193 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 ATXN1P54253 815 aaKnown RBP18.99■□□□□ 0.63
HMGN1-207ENST00000436324 SNX16P57768 344 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 RNASE9P60153 205 aaKnown RBP18.99■□□□□ 0.63
HMGN1-207ENST00000436324 SLC6A3Q01959 620 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 EIF4HQ15056 248 aaKnown RBP18.99■□□□□ 0.63
HMGN1-207ENST00000436324 FUT11Q495W5 492 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 MS4A13Q5J8X5 152 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 PLA2G2CQ5R387 149 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 RAP1GAP2Q684P5 730 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 SMYD5Q6GMV2 418 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 OLFML1Q6UWY5 402 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 LPCAT2Q7L5N7 544 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 CYP2U1Q7Z449 544 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 CHSY1Q86X52 802 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 MFN1Q8IWA4 741 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 LGI2Q8N0V4 545 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 CARNMT1Q8N4J0 409 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 AOPEPQ8N6M6 819 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 HJURPQ8NCD3 748 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-207ENST00000436324 ANKRD20A12PQ8NF67 263 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 WFIKKN2Q8TEU8 576 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 SLC2A13Q96QE2 648 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 ASNSD1Q9NWL6 643 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 DDIT4Q9NX09 232 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 ZNF292O60281 2723 aa18.99■□□□□ 0.63
HMGN1-207ENST00000436324 TYW5A2RUC4 315 aaKnown RBP18.98■□□□□ 0.63
HMGN1-207ENST00000436324 NPC1O15118 1278 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 EPHB6O15197 1021 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 IGLV3-25P01717 112 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 MMEP08473 750 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 TACR2P21452 398 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 PRKCHP24723 683 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 SYCP1Q15431 976 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 FNDC3BQ53EP0 1204 aaKnown RBP18.98■□□□□ 0.63
HMGN1-207ENST00000436324 MBLAC2Q68D91 279 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 SERPINA13PQ6UXR4 307 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 DDX1Q92499 740 aaKnown RBP18.98■□□□□ 0.63
HMGN1-207ENST00000436324 PIGKQ92643 395 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 MRGPRX1Q96LB2 322 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 CD93Q9NPY3 652 aa18.98■□□□□ 0.63
HMGN1-207ENST00000436324 VPS45Q9NRW7 570 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms