RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 UBA3Q8TBC4 463 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 CYB5D2Q8WUJ1 264 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 PCED1AQ9H1Q7 454 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 LHX5Q9H2C1 402 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 GAREM1Q9H706 876 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 GDPD2Q9HCC8 539 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 ABCB8Q9NUT2 735 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 GGA2Q9UJY4 613 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 STOML2Q9UJZ1 356 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 PLA2G4CQ9UP65 541 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 O00370 1275 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 ZNF883P0CG24 379 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 VDRP11473 427 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 LCP1P13796 627 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 FKBP3Q00688 224 aaKnown RBP16.37■□□□□ 0.21
CALD1-208ENST00000435928 COBLL1Q53SF7 1204 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 ZNF658Q5TYW1 1059 aaPredicted RBP16.37■□□□□ 0.21
CALD1-208ENST00000435928 ZNF366Q8N895 744 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 SETD7Q8WTS6 366 aaKnown RBP16.37■□□□□ 0.21
CALD1-208ENST00000435928 ADAMTS14Q8WXS8 1223 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 KCTD13Q8WZ19 329 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 TMA16Q96EY4 203 aaKnown RBP16.37■□□□□ 0.21
CALD1-208ENST00000435928 TMEM245Q9H330 911 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 FBRSQ9HAH7 460 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 IL21RQ9HBE5 538 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 CNGB3Q9NQW8 809 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 TM7SF3Q9NS93 570 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 ARMCX3Q9UH62 379 aaPredicted RBP16.37■□□□□ 0.21
CALD1-208ENST00000435928 PCOLCE2Q9UKZ9 415 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 APOBEC2Q9Y235 224 aaKnown RBP16.37■□□□□ 0.21
CALD1-208ENST00000435928 PLXNB3Q9ULL4 1909 aa16.37■□□□□ 0.21
CALD1-208ENST00000435928 CBFA2T3O75081 653 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 PABPC1P11940 636 aaKnown RBP16.36■□□□□ 0.21
CALD1-208ENST00000435928 AFF3P51826 1226 aaKnown RBP16.36■□□□□ 0.21
CALD1-208ENST00000435928 DAOAP59103 153 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 LRRC63Q05C16 580 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 LRMPQ12912 555 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 HLA-BQ31612 363 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 ADIPOR2Q86V24 386 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 ZC3H3Q8IXZ2 948 aaKnown RBP16.36■□□□□ 0.21
CALD1-208ENST00000435928 SCML4Q8N228 414 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 UBR7Q8N806 425 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.36■□□□□ 0.21
CALD1-208ENST00000435928 PNPLA1Q8N8W4 532 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 SLC35C1Q96A29 364 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 GSDMAQ96QA5 445 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 KIAA1257Q9ULG3 409 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 FNDC3AQ9Y2H6 1198 aaKnown RBP16.36■□□□□ 0.21
CALD1-208ENST00000435928 LAMA5O15230 3695 aa16.36■□□□□ 0.21
CALD1-208ENST00000435928 A0A1B0GVT2 93 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 TRIM49BA6NDI0 452 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 ATP5BP06576 529 aaKnown RBP16.35■□□□□ 0.21
CALD1-208ENST00000435928 ACSL1P33121 698 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 SLC11A2P49281 568 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 RGS7P49802 495 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 SGSHP51688 502 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 PMS1P54277 932 aaKnown RBP16.35■□□□□ 0.21
CALD1-208ENST00000435928 BNC1Q01954 994 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 TTC31Q49AM3 519 aaPredicted RBP16.35■□□□□ 0.21
CALD1-208ENST00000435928 PKDCCQ504Y2 493 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 NUGGCQ68CJ6 796 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 MBLAC2Q68D91 279 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 ANKRD40Q6AI12 368 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 MSANTD2Q6P1R3 559 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 TMEM270Q6UE05 265 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 LCLAT1Q6UWP7 414 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 GLRX5Q86SX6 157 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 C1orf216Q8TAB5 229 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 GOLGA1Q92805 767 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 C6orf106Q9H6K1 298 aaPredicted RBP16.35■□□□□ 0.21
CALD1-208ENST00000435928 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.35■□□□□ 0.21
CALD1-208ENST00000435928 PLXNA2O75051 1894 aa16.35■□□□□ 0.21
CALD1-208ENST00000435928 ATRXP46100 2492 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 M0QYV0 167 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 PIK3R2O00459 728 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 FLRT2O43155 660 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 TBL1XO60907 577 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 SMC2O95347 1197 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 SEMA4FO95754 770 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 IGLV3-27P01718 113 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 DNTTP04053 509 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 PAEPP09466 180 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 DLDP09622 509 aaKnown RBP16.34■□□□□ 0.21
CALD1-208ENST00000435928 POLR2EP19388 210 aaKnown RBP16.34■□□□□ 0.21
CALD1-208ENST00000435928 CSNK1EP49674 416 aaKnown RBP16.34■□□□□ 0.21
CALD1-208ENST00000435928 ZBTB16Q05516 673 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 RING1Q06587 406 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 TEAD4Q15561 434 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 PTPRNQ16849 979 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 RFWD3Q6PCD5 774 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 KIAA0907Q7Z7F0 614 aaPredicted RBP16.34■□□□□ 0.21
CALD1-208ENST00000435928 PROSER1Q86XN7 944 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 UNC45BQ8IWX7 931 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 FMR1NBQ8N0W7 255 aaPredicted RBP16.34■□□□□ 0.21
CALD1-208ENST00000435928 ZNF557Q8N988 423 aaPredicted RBP16.34■□□□□ 0.21
CALD1-208ENST00000435928 WFDC5Q8TCV5 224 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 IRGQQ8WZA9 623 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 TFAP2BQ92481 460 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 SMARCE1Q969G3 411 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 NT5C1BQ96P26 610 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms