RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 A6NJR5 290 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 GYG2O15488 501 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 MAP3K13O43283 966 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 RECQL4O94761 1208 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 GSRP00390 522 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 OCRLQ01968 901 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 CBLBQ13191 982 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 KPNB1Q14974 876 aaKnown RBP10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 STILQ15468 1287 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 C9orf57Q5W0N0 161 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 SLC2A14Q8TDB8 520 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 E2F7Q96AV8 911 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 ADAMTS10Q9H324 1103 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 SIRPGQ9P1W8 387 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 PSAT1Q9Y617 370 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 TRDMT1O14717 391 aaKnown RBP10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 MFSD11O43934 449 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 MTA1Q13330 715 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 BSPRYQ5W0U4 402 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 SLC26A9Q7LBE3 791 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 CATSPER4Q7RTX7 472 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 NUDCD3Q8IVD9 361 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 PDCD7Q8N8D1 485 aaKnown RBP10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 ENDOVQ8N8Q3 282 aaKnown RBP10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 EBF4Q9BQW3 602 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 BLOC1S6Q9UL45 172 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 A6NHS1 94 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 KLF11O14901 512 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 KRT36O76013 467 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 PTPN9P43378 593 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 SOX4Q06945 474 aaPredicted RBP10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 RCN2Q14257 317 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 HIC1Q14526 733 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 WASHC2DQ5SRD0 308 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 HEATR6Q6AI08 1181 aaKnown RBP10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 ANO7Q6IWH7 933 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 CES3Q6UWW8 571 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 CDKL3Q8IVW4 592 aaPredicted RBP10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 TMEM40Q8WWA1 233 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 QKIQ96PU8 341 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 PREBQ9HCU5 417 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 MOCS1Q9NZB8 636 aa10.73□□□□□ -0.69
CLSTN1-203ENST00000435891 E2F8A0AVK6 867 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 LYPLA1O75608 230 aaPredicted RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 BEST1O76090 585 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 IMPDH2P12268 514 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 YY1P25490 414 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 MAGEA8P43361 318 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 MAGEA10P43363 369 aaPredicted RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 SESN2P58004 480 aaPredicted RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 OTUD1Q5VV17 481 aaPredicted RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 CASC4Q6P4E1 433 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 FASTKD5Q7L8L6 764 aaKnown RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 NT5DC4Q86YG4 428 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 SHKBP1Q8TBC3 707 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 DEPDC1BQ8WUY9 529 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 CACNG4Q9UBN1 327 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 PCDHA11Q9Y5I1 949 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 CLDN5O00501 218 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 GPR32O75388 356 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 KRT38O76015 456 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 ALDOAP04075 364 aaKnown RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 ENO1P06733 434 aaKnown RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 MMP3P08254 477 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 ESRRAP11474 423 aaPredicted RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 NDUFV1P49821 464 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 GTF2A2P52657 109 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 AQP5P55064 265 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 SEMA5AQ13591 1074 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 KYAT1Q16773 422 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 ARHGAP17Q68EM7 881 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 DEFB106AQ8N104 65 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 ANKRD52Q8NB46 1076 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 STKLD1Q8NE28 680 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 NRG4Q8WWG1 115 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 HTR3CQ8WXA8 447 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 OLFM3Q96PB7 478 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 FRMD8Q9BZ67 464 aaPredicted RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 ITM2AO43736 263 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 AMHP03971 560 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 RARBP10826 455 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 TPSB2P20231 275 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 BST2Q10589 180 aaKnown RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 TPSAB1Q15661 275 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 SLC27A1Q6PCB7 646 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 ALKAL1Q6UXT8 129 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 SDCCAG8Q86SQ7 713 aaPredicted RBP10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 TTC39CQ8N584 583 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 DTX3LQ8TDB6 740 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 DNAJC9Q8WXX5 260 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 ARNTL2Q8WYA1 636 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 FAM149B1Q96BN6 582 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 LRRC39Q96DD0 335 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 CLPTM1LQ96KA5 538 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 ZNF778Q96MU6 729 aa10.72□□□□□ -0.69
CLSTN1-203ENST00000435891 NDNQ99608 321 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms