RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 I3L4J1 428 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 RNF103O00237 685 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 CRHR1P34998 444 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 MAP2K2P36507 400 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 PITX1P78337 314 aaPredicted RBP19.15■□□□□ 0.66
CLK1-205ENST00000434813 PAQR9Q6ZVX9 377 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 FAM13CQ8NE31 585 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 ARMC2Q8NEN0 867 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 NDRG1Q92597 394 aaKnown RBP19.15■□□□□ 0.66
CLK1-205ENST00000434813 TUBB6Q9BUF5 446 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 YY1AP1Q9H869 796 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 CREBZFQ9NS37 354 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 PCMTD2Q9NV79 361 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 RPL26L1Q9UNX3 145 aaKnown RBP19.15■□□□□ 0.66
CLK1-205ENST00000434813 PTGESO14684 152 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 CA12O43570 354 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 ANP32DO95626 131 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 PTPN1P18031 435 aaKnown RBP19.15■□□□□ 0.66
CLK1-205ENST00000434813 EPHB2P29323 1055 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 TM4SF4P48230 202 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 PDK1Q15118 436 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 ACCSLQ4AC99 568 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 FAM91A1Q658Y4 838 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 ATG16L1Q676U5 607 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 CLEC20AQ6ZU45 233 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 LONP2Q86WA8 852 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 CCNJLQ8IV13 435 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 SIX6OS1Q8N1H7 587 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 COLGALT1Q8NBJ5 622 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 P2RY11Q96G91 374 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 PPP1R10Q96QC0 940 aaKnown RBP19.15■□□□□ 0.66
CLK1-205ENST00000434813 FERMT1Q9BQL6 677 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 LRRC4Q9HBW1 653 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 C15orf41Q9Y2V0 281 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 NR2E3Q9Y5X4 410 aa19.15■□□□□ 0.66
CLK1-205ENST00000434813 WDR27A2RRH5 827 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 CLDN5O00501 218 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 CYB561D2O14569 222 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 GABRDO14764 452 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 BEST1O76090 585 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 SERPINB3P29508 390 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 NIPAL4Q0D2K0 466 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 DPYSQ14117 519 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 PAFAH1B3Q15102 231 aaKnown RBP19.14■□□□□ 0.65
CLK1-205ENST00000434813 TEX44Q53QW1 395 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 MROH9Q5TGP6 573 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 NDUFAF2Q8N183 169 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 E2F7Q96AV8 911 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 PTCD3Q96EY7 689 aaKnown RBP19.14■□□□□ 0.65
CLK1-205ENST00000434813 MECRQ9BV79 373 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 SLC13A1Q9BZW2 595 aa19.14■□□□□ 0.65
CLK1-205ENST00000434813 C17orf102A2RUQ5 167 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 SDR42E2A6NKP2 422 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 M0QYT0 321 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 PPP1R12AO14974 1030 aaPredicted RBP19.13■□□□□ 0.65
CLK1-205ENST00000434813 ZNF189O75820 626 aaPredicted RBP19.13■□□□□ 0.65
CLK1-205ENST00000434813 PGAM1P18669 254 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 ACAT1P24752 427 aaKnown RBP19.13■□□□□ 0.65
CLK1-205ENST00000434813 HOXC8P31273 242 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 OCRLQ01968 901 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 AP1B1Q10567 949 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 BST1Q10588 318 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 NAB1Q13506 487 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 KRT72Q14CN4 511 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 TLDC1Q6P9B6 456 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 NME8Q8N427 588 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.13■□□□□ 0.65
CLK1-205ENST00000434813 PDCD7Q8N8D1 485 aaKnown RBP19.13■□□□□ 0.65
CLK1-205ENST00000434813 WNT8BQ93098 351 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 TRIP12Q14669 1992 aaPredicted RBP19.13■□□□□ 0.65
CLK1-205ENST00000434813 BIRC5O15392 142 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 MYL3P08590 195 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 MYL2P10916 166 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 AIF1P55008 147 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 TMPRSS15P98073 1019 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 DEUP1Q05D60 604 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 DBN1Q16643 649 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 WSCD1Q658N2 575 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 TWF2Q6IBS0 349 aaKnown RBP19.13■□□□□ 0.65
CLK1-205ENST00000434813 RFX8Q6ZV50 586 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 HHIPL1Q96JK4 782 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 SLC9A7Q96T83 725 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 NAT9Q9BTE0 207 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 KATNAL1Q9BW62 490 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 FBXO6Q9NRD1 293 aaPredicted RBP19.13■□□□□ 0.65
CLK1-205ENST00000434813 TMPRSS4Q9NRS4 437 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 PIGVQ9NUD9 493 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 KCNK4Q9NYG8 393 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 Q9Y3F1 56 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 DOCK3Q8IZD9 2030 aa19.13■□□□□ 0.65
CLK1-205ENST00000434813 CCDC22O60826 627 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 FAM200BP0CF97 657 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 IBSPP21815 317 aaPredicted RBP19.12■□□□□ 0.65
CLK1-205ENST00000434813 NDUFV1P49821 464 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 FCGRTP55899 365 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 ZBTB16Q05516 673 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 CDK18Q07002 472 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 WASHC5Q12768 1159 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 MDH1BQ5I0G3 518 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 WASHC2DQ5SRD0 308 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms