RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 N4BP2L1Q5TBK1 243 aaPredicted RBP12.16□□□□□ -0.46
CD44-209ENST00000433892 SLC27A1Q6PCB7 646 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 LMNTD2Q8IXW0 634 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 ARHGAP24Q8N264 748 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 RAB3IL1Q8TBN0 382 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 FAM149B1Q96BN6 582 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 OLFM3Q96PB7 478 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 CCDC106Q9BWC9 280 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 GTF2IRD1Q9UHL9 959 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 TAGLN3Q9UI15 199 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 EMCNQ9ULC0 261 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 CORO1CQ9ULV4 474 aaPredicted RBP12.16□□□□□ -0.46
CD44-209ENST00000433892 DERAQ9Y315 318 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 SPECC1L-ADORA2AF8WAN1 911 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 RNF103O00237 685 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 RECQL4O94761 1208 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 ALDH1A2O94788 518 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 CNTFP26441 200 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 PITX1P78337 314 aaPredicted RBP12.16□□□□□ -0.46
CD44-209ENST00000433892 NIPAL4Q0D2K0 466 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 PDE1CQ14123 709 aaPredicted RBP12.16□□□□□ -0.46
CD44-209ENST00000433892 FBXO47Q5MNV8 452 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 STEAP4Q687X5 459 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 MBLAC2Q68D91 279 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 CES3Q6UWW8 571 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 PACS1Q6VY07 963 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 KYAT3Q6YP21 454 aaKnown RBP12.16□□□□□ -0.46
CD44-209ENST00000433892 LRRC74BQ6ZQY2 392 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 ARCQ7LC44 396 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 ZNF410Q86VK4 478 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 DEFB106AQ8N104 65 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 CCNYQ8ND76 341 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 ARNTL2Q8WYA1 636 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 P2RY11Q96G91 374 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 PGLYRP2Q96PD5 576 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 THTPAQ9BU02 230 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 VTA1Q9NP79 307 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 XPNPEP3Q9NQH7 507 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 ZFATQ9P243 1243 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 STX18Q9P2W9 335 aaKnown RBP12.16□□□□□ -0.46
CD44-209ENST00000433892 MORF4L1Q9UBU8 362 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 WASF2Q9Y6W5 498 aa12.16□□□□□ -0.46
CD44-209ENST00000433892 A6NHS1 94 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 KPNA7A9QM74 516 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 MAGEC1O60732 1142 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 GCKP35557 465 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 GMPRP36959 345 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 FDFT1P37268 417 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 SULT1E1P49888 294 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 RAP1GDS1P52306 607 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 WASHC5Q12768 1159 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 DCAF6Q58WW2 860 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 CMPK2Q5EBM0 449 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 LRRC8BQ6P9F7 803 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 CYS1Q717R9 158 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 MARK2Q7KZI7 788 aaKnown RBP12.15□□□□□ -0.46
CD44-209ENST00000433892 STRADAQ7RTN6 431 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 SCUBE1Q8IWY4 988 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 CDKL2Q92772 493 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 CDCA5Q96FF9 252 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 ZNF778Q96MU6 729 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 OSMRQ99650 979 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 ADAMTS10Q9H324 1103 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 SNX25Q9H3E2 840 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 GOLGA2P5Q9HBQ8 144 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.15□□□□□ -0.46
CD44-209ENST00000433892 FZD10Q9ULW2 581 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 DNAJC16Q9Y2G8 782 aa12.15□□□□□ -0.46
CD44-209ENST00000433892 E2F8A0AVK6 867 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 HACD1B0YJ81 288 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 CREB3O43889 395 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 SERPINA6P08185 405 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 FGF3P11487 239 aaPredicted RBP12.14□□□□□ -0.47
CD44-209ENST00000433892 MLNP12872 115 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 PSMB4P28070 264 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 TKTP29401 623 aaKnown RBP12.14□□□□□ -0.47
CD44-209ENST00000433892 MATKP42679 507 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 MXRA7P84157 204 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 PDE1BQ01064 536 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 OLIG2Q13516 323 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 PPM1JQ5JR12 505 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 TEDDM1Q5T9Z0 273 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 TP53INP2Q8IXH6 220 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 ULK2Q8IYT8 1036 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 NME8Q8N427 588 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 SHCBP1Q8NEM2 672 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 PIWIL2Q8TC59 973 aaKnown RBP12.14□□□□□ -0.47
CD44-209ENST00000433892 EMID1Q96A84 441 aaPredicted RBP12.14□□□□□ -0.47
CD44-209ENST00000433892 PGBD4Q96DM1 585 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 SGIP1Q9BQI5 828 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 PLA2G4CQ9UP65 541 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 CEP350Q5VT06 3117 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 DPPA5A6NC42 116 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 MEI4A8MW99 385 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 PLIN3O60664 434 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 TM7SF2O76062 418 aa12.14□□□□□ -0.47
CD44-209ENST00000433892 SNAI1O95863 264 aaPredicted RBP12.14□□□□□ -0.47
CD44-209ENST00000433892 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms