RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 CRTC1Q6UUV9 634 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 KIAA0408Q6ZU52 694 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 SPATA2LQ8IUW3 424 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-205ENST00000433888 TMEM174Q8WUU8 243 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 NUDCD2Q8WVJ2 157 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 ZFPM2Q8WW38 1151 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 KAT2BQ92831 832 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 INPP5DQ92835 1189 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 NEUROG1Q92886 237 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 PHKBQ93100 1093 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 RBM38Q9H0Z9 239 aaKnown RBP4.35□□□□□ -1.71
PTPN4-205ENST00000433888 CDCP1Q9H5V8 836 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 UTS2RQ9UKP6 389 aa4.35□□□□□ -1.71
PTPN4-205ENST00000433888 CLEC18AA5D8T8 446 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 OR2W5A6NFC9 320 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 IFITM10A6NMD0 228 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 SLC3A2P08195 630 aaKnown RBP4.34□□□□□ -1.71
PTPN4-205ENST00000433888 RFPL3SP0C7P2 107 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 SLC5A2P31639 672 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 SEMA3BQ13214 749 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 BFSP2Q13515 415 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 PPP2R5AQ15172 486 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 C6orf10Q5SRN2 563 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 LIPMQ5VYY2 423 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 ISM2Q6H9L7 571 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 CAPRIN2Q6IMN6 1127 aaKnown RBP4.34□□□□□ -1.71
PTPN4-205ENST00000433888 DHRS13Q6UX07 377 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 CLEC18CQ8NCF0 446 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 AAMDCQ9H7C9 122 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 ERVK-5Q9HDB9 667 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 SPAG4Q9NPE6 437 aa4.34□□□□□ -1.71
PTPN4-205ENST00000433888 CLCA1A8K7I4 914 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 H0YGN5 161 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 CCNT2O60583 730 aaKnown RBP4.33□□□□□ -1.72
PTPN4-205ENST00000433888 COQ9O75208 318 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 FGF3P11487 239 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-205ENST00000433888 ALADP13716 330 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 RHCEP18577 417 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 MST1P26927 711 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 MLH1P40692 756 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 RFX2P48378 723 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 DAG1Q14118 895 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 SLC4A8Q2Y0W8 1093 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 GLE1Q53GS7 698 aaKnown RBP4.33□□□□□ -1.72
PTPN4-205ENST00000433888 CCDC144NLQ6NUI1 221 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 PIK3AP1Q6ZUJ8 805 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 TRILQ7L0X0 811 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 DDIASQ8IXT1 998 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 ZBTB8BQ8NAP8 495 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-205ENST00000433888 LPAR1Q92633 364 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 ELOVL1Q9BW60 279 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 CD93Q9NPY3 652 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 TMOD4Q9NZQ9 345 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 IPO11Q9UI26 975 aaKnown RBP4.33□□□□□ -1.72
PTPN4-205ENST00000433888 LAMP3Q9UQV4 416 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 B3GNT3Q9Y2A9 372 aa4.33□□□□□ -1.72
PTPN4-205ENST00000433888 FRMPD2Q68DX3 1309 aaPredicted RBP4.32□□□□□ -1.72
PTPN4-205ENST00000433888 ACOT8O14734 319 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 THAP12O43422 761 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 KEAP1Q14145 624 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 PLEKHG6Q3KR16 790 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 ANXA2RQ3ZCQ2 193 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 KIAA1755Q5JYT7 1200 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 FAXCQ5TGI0 409 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 C16orf89Q6UX73 402 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 EXD3Q8N9H8 876 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 ATP11CQ8NB49 1132 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 OR52N4Q8NGI2 321 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 ATP2A3Q93084 1043 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 IQCDQ96DY2 449 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 MED30Q96HR3 178 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 LMLNQ96KR4 655 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 GPR78Q96P69 363 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 IL21RQ9HBE5 538 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 GJB4Q9NTQ9 266 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 MDFICQ9P1T7 246 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 PCDHGB6Q9Y5F9 930 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 EID1Q9Y6B2 187 aa4.32□□□□□ -1.72
PTPN4-205ENST00000433888 VSTM5A8MXK1 200 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 PODXLO00592 558 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 MDM4O15151 490 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 DHHO43323 396 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 SLC8A1P32418 973 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 EGR4Q05215 589 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 ATP1A4Q13733 1029 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.31□□□□□ -1.72
PTPN4-205ENST00000433888 RAP1GAP2Q684P5 730 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 MRNIPQ6NTE8 343 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-205ENST00000433888 GPSM1Q86YR5 675 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 CCDC28AQ8IWP9 274 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 RNF152Q8N8N0 203 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 FAM47BQ8NA70 645 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 CENPIQ92674 756 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-205ENST00000433888 CLMNQ96JQ2 1002 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 ZNF347Q96SE7 839 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 HTATIP2Q9BUP3 242 aa4.31□□□□□ -1.72
PTPN4-205ENST00000433888 SF3B5Q9BWJ5 86 aaKnown RBP4.31□□□□□ -1.72
PTPN4-205ENST00000433888 TRIM2Q9C040 744 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms