RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 BICDL2A1A5D9 508 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 E5RJQ4 531 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 CFIP05156 583 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 MAOBP27338 520 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 NUMBP49757 651 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 SLC8A3P57103 927 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 RPS24P62847 133 aaKnown RBP12.27□□□□□ -0.45
HDAC4-202ENST00000430200 FAM193AP78312 1265 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 ZNF252P-AS1Q0IIN9 211 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 TAF5Q15542 800 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 UAP1L1Q3KQV9 507 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 PREPLQ4J6C6 727 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-202ENST00000430200 MMS22LQ6ZRQ5 1243 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 SCUBE3Q8IX30 993 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.27□□□□□ -0.45
HDAC4-202ENST00000430200 TRIML1Q8N9V2 468 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 DEFB124Q8NES8 71 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 RNF139Q8WU17 664 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 IRGQQ8WZA9 623 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 DNAI2Q9GZS0 605 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 TMEM245Q9H330 911 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 INTS6Q9UL03 887 aaKnown RBP12.27□□□□□ -0.45
HDAC4-202ENST00000430200 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.27□□□□□ -0.45
HDAC4-202ENST00000430200 PKD1L2Q7Z442 2459 aa12.27□□□□□ -0.45
HDAC4-202ENST00000430200 LOC400499M0QZD8 3231 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 FAM170AA1A519 330 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 AP5Z1O43299 807 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 IGLV3-25P01717 112 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 KRT5P13647 590 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 PPP1R2P41236 205 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 TPMTP51580 245 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 IRAK1P51617 712 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 BNC1Q01954 994 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 EIF4HQ15056 248 aaKnown RBP12.26□□□□□ -0.45
HDAC4-202ENST00000430200 DPCR1Q3MIW9 517 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 MPPE1Q53F39 396 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 FSCBQ5H9T9 825 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 ADGRF1Q5T601 910 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 PIK3R6Q5UE93 754 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 OTUD1Q5VV17 481 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-202ENST00000430200 CHST9Q7L1S5 443 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 WDTC1Q8N5D0 677 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 TOE1Q96GM8 510 aaKnown RBP12.26□□□□□ -0.45
HDAC4-202ENST00000430200 SLC39A13Q96H72 371 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 TMEM121BQ9BXQ6 578 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-202ENST00000430200 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 GTPBP4Q9BZE4 634 aaKnown RBP12.26□□□□□ -0.45
HDAC4-202ENST00000430200 PRDM16Q9HAZ2 1276 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 UBE2TQ9NPD8 197 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-202ENST00000430200 WSB2Q9NYS7 404 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-202ENST00000430200 RWDD2AQ9UIY3 292 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 GGA2Q9UJY4 613 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 KIAA1257Q9ULG3 409 aa12.26□□□□□ -0.45
HDAC4-202ENST00000430200 ZFYVE26Q68DK2 2539 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 ACSL4O60488 711 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 TBL1XO60907 577 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 GJB3O75712 270 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 LETM1O95202 739 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-202ENST00000430200 LATS1O95835 1130 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 IGLV3-19P01714 112 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 CYBBP04839 570 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 EPHX1P07099 455 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 PABPC1P11940 636 aaKnown RBP12.25□□□□□ -0.45
HDAC4-202ENST00000430200 GNA15P30679 374 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 CTSOP43234 321 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-202ENST00000430200 HARS2P49590 506 aaKnown RBP12.25□□□□□ -0.45
HDAC4-202ENST00000430200 TBX4P57082 545 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 UBE2HP62256 183 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 SHC2P98077 582 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 LMAN2Q12907 356 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 PDCLQ13371 301 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 EIF4EBP2Q13542 120 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-202ENST00000430200 CAMK2GQ13555 558 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-202ENST00000430200 HSP90AA4PQ58FG1 418 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 SPDYCQ5MJ68 293 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 SERPINA13PQ6UXR4 307 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 SLC36A4Q6YBV0 504 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 NUDT18Q6ZVK8 323 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 PIP4P1Q86T03 277 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 CIR1Q86X95 450 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-202ENST00000430200 TMPRSS6Q8IU80 811 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 PASD1Q8IV76 773 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 CFAP52Q8N1V2 620 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 MINDY1Q8N5J2 469 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 ZNF606Q8WXB4 792 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 DDX1Q92499 740 aaKnown RBP12.25□□□□□ -0.45
HDAC4-202ENST00000430200 SHC3Q92529 594 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 ZNF419Q96HQ0 510 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-202ENST00000430200 MRGPRX3Q96LB0 322 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 HSFY1Q96LI6 401 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 CPXM1Q96SM3 734 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 GPR174Q9BXC1 333 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 SLC2A11Q9BYW1 496 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 ST7Q9NRC1 585 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 SERGEFQ9UGK8 458 aa12.25□□□□□ -0.45
HDAC4-202ENST00000430200 SPAARA0A1B0GVQ0 90 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 IRAK2O43187 625 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 THAP12O43422 761 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms