RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 ACKR2O00590 384 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 APOL1O14791 398 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 GCATO75600 419 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 ALDH1A2O94788 518 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 IL18RAPO95256 599 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 C6orf222P0C671 652 aaPredicted RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 FGF3P11487 239 aaPredicted RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 ALOX15P16050 662 aaPredicted RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 PDGFRAP16234 1089 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 CYP3A5P20815 502 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 CNTFP26441 200 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PDE1BQ01064 536 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 CCDC14Q49A88 953 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 C1orf146Q5VVC0 180 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 EEF1DP3Q658K8 133 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 ATG14Q6ZNE5 492 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 FAM183BPQ6ZVS7 135 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PRRT2Q7Z6L0 340 aaPredicted RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 MAP7D3Q8IWC1 876 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 ZBTB8OSQ8IWT0 167 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 TMEM130Q8N3G9 435 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 ZBTB8BQ8NAP8 495 aaPredicted RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 RNF149Q8NC42 400 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PIWIL2Q8TC59 973 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 ACMSDQ8TDX5 336 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 FAM172AQ8WUF8 416 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 DDX50Q9BQ39 737 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 TRIM56Q9BRZ2 755 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 CYP3A43Q9HB55 503 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 XAB2Q9HCS7 855 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 SSX2IPQ9Y2D8 614 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PTPRFP10586 1907 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PAPPA2Q9BXP8 1791 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 A0A0J9YVX5 310 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 NOP56O00567 594 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 ITM2AO43736 263 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PRPSAP2O60256 369 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 RNASEH1O60930 286 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 USP1O94782 785 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 METTL18O95568 372 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 TOP3BO95985 862 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 ZBED1O96006 694 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PRKCGP05129 697 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 APRTP07741 180 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PFKMP08237 780 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 SPATA31D3P0C874 917 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 SRGAP2CP0DJJ0 459 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 IDO1P14902 403 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 BCAR1P56945 870 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PRKG1Q13976 671 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 KCTD2Q14681 263 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 FASTKD1Q53R41 847 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 MROH9Q5TGP6 573 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 ATF7IP2Q5U623 682 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 ZCCHC23Q6ZST2 131 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 SPATA31D4Q6ZUB0 917 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 MAVSQ7Z434 540 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 ZNF554Q86TJ5 538 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 PDSS2Q86YH6 399 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 TMEM192Q8IY95 271 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 MPP5Q8N3R9 675 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 GSTCDQ8NEC7 633 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 ZC3H15Q8WU90 426 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 SNRNP27Q8WVK2 155 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 KHSRPQ92945 711 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDH13-202ENST00000428848 TBCBQ99426 244 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 TTC1Q99614 292 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 ZNF670Q9BS34 389 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 TMEM165Q9HC07 324 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 TIMMDC1Q9NPL8 285 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 RHBDL2Q9NX52 303 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 UTP6Q9NYH9 597 aaKnown RBP9.09□□□□□ -0.95
CDH13-202ENST00000428848 ITGA11Q9UKX5 1188 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 WDR90Q96KV7 1748 aa9.09□□□□□ -0.95
CDH13-202ENST00000428848 SBF1O95248 1867 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 ZNF195O14628 629 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 MDM4O15151 490 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 STRNO43815 780 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 LGR5O75473 907 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 KLHL2O95198 593 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 NFICP08651 508 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 CXCL8P10145 99 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 ETS2P15036 469 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 CPA3P15088 417 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 ATICP31939 592 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 MAGEA10P43363 369 aaPredicted RBP9.08□□□□□ -0.96
CDH13-202ENST00000428848 CLCN2P51788 898 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 PHEXP78562 749 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 XIAPP98170 497 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 NIPAL4Q0D2K0 466 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 INCA1Q0VD86 236 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 PPIL2Q13356 520 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 SEMA5AQ13591 1074 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 KRT81Q14533 505 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 CA9Q16790 459 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 EFHC1Q5JVL4 640 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 MAP1SQ66K74 1059 aaPredicted RBP9.08□□□□□ -0.96
CDH13-202ENST00000428848 LCLAT1Q6UWP7 414 aa9.08□□□□□ -0.96
CDH13-202ENST00000428848 RAPH1Q70E73 1250 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms