RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 EBF4Q9BQW3 602 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 C16orf70Q9BSU1 422 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 CCDC28BQ9BUN5 200 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 B3GNT5Q9BYG0 378 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 XPNPEP3Q9NQH7 507 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ZDHHC7Q9NXF8 308 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 SOX13Q9UN79 622 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 MAD1L1Q9Y6D9 718 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PDCD11Q14690 1871 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 SCN4AP35499 1836 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 SCN1AP35498 2009 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 WDR27A2RRH5 827 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 MAGEA13PA6NCF6 341 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ITM2AO43736 263 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 AHCYL1O43865 530 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 OPHN1O60890 802 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 SERPINE1P05121 402 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 HOXD8P13378 290 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ADORA2AP29274 412 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 SLC1A6P48664 564 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 PPP6R3Q5H9R7 873 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 MARCH8Q5T0T0 291 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 FAM182AQ5T1J6 154 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 DPH6Q7L8W6 267 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 MAVSQ7Z434 540 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 WDR75Q8IWA0 830 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 CCDC185Q8N715 623 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 C7orf31Q8N865 590 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ZNF483Q8TF39 744 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 UCMAQ8WVF2 138 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 FAM161BQ96MY7 647 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 ZMAT2Q96NC0 199 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 VCXQ9H320 206 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 DHX35Q9H5Z1 703 aaKnown RBP8.1□□□□□ -1.11
LRCH3-204ENST00000428136 CSADQ9Y600 493 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
LRCH3-204ENST00000428136 DICER1Q9UPY3 1922 aaKnown RBP8.09□□□□□ -1.11
LRCH3-204ENST00000428136 MCM3APO60318 1980 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 BUD23O43709 281 aaKnown RBP8.09□□□□□ -1.11
LRCH3-204ENST00000428136 CIB2O75838 187 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 VTNP04004 478 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 PDHA1P08559 390 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 PRDX6P30041 224 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 HOXA11P31270 313 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-204ENST00000428136 CPA2P48052 419 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 BCAT1P54687 386 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 AP2B1P63010 937 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 PAFAH1B3Q15102 231 aaKnown RBP8.09□□□□□ -1.11
LRCH3-204ENST00000428136 ATG14Q6ZNE5 492 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 SLC7A14Q8TBB6 771 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 KBTBD7Q8WVZ9 684 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 STON2Q8WXE9 905 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 CDKL2Q92772 493 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 TSPAN18Q96SJ8 248 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 MAGEB5Q9BZ81 275 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 CXCL16Q9H2A7 254 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 IGSF9Q9P2J2 1179 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 ADAM28Q9UKQ2 775 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 TSC2P49815 1807 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 CCDC195A0A1B0GUA6 201 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 SPDYE5A6NIY4 337 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 PIRO00625 290 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 TPP1O14773 563 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 KIF3CO14782 793 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 PPEF2O14830 753 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 MAP3K6O95382 1288 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 ITGA2BP08514 1039 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 MATKP42679 507 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 NUMBP49757 651 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 IDH3AP50213 366 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 CSRP3P50461 194 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 CDK7P50613 346 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 ATXN1P54253 815 aaKnown RBP8.09□□□□□ -1.11
LRCH3-204ENST00000428136 ALDH18A1P54886 795 aaKnown RBP8.09□□□□□ -1.11
LRCH3-204ENST00000428136 SESN3P58005 492 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 UBAP2LQ14157 1087 aaKnown RBP8.09□□□□□ -1.11
LRCH3-204ENST00000428136 RCN2Q14257 317 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 SLC25A52Q3SY17 297 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 N4BP2L1Q5TBK1 243 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-204ENST00000428136 C6orf163Q5TEZ5 329 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 ERO1BQ86YB8 467 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 COLGALT1Q8NBJ5 622 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 CLEC4CQ8WTT0 213 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 LRRN4Q8WUT4 740 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 TRAPPC9Q96Q05 1148 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 MCMBPQ9BTE3 642 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 ADAMTS10Q9H324 1103 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 GDAP2Q9NXN4 497 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.09□□□□□ -1.11
LRCH3-204ENST00000428136 AKT3Q9Y243 479 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 DNAJC16Q9Y2G8 782 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 SNX9Q9Y5X1 595 aa8.09□□□□□ -1.11
LRCH3-204ENST00000428136 TOP3BO95985 862 aaKnown RBP8.08□□□□□ -1.12
LRCH3-204ENST00000428136 KITP10721 976 aa8.08□□□□□ -1.12
LRCH3-204ENST00000428136 CCDC130P13994 396 aa8.08□□□□□ -1.12
LRCH3-204ENST00000428136 IGBP1P78318 339 aa8.08□□□□□ -1.12
LRCH3-204ENST00000428136 KDSRQ06136 332 aa8.08□□□□□ -1.12
LRCH3-204ENST00000428136 PRKG1Q13976 671 aa8.08□□□□□ -1.12
LRCH3-204ENST00000428136 ZNF792Q3KQV3 632 aa8.08□□□□□ -1.12
LRCH3-204ENST00000428136 EFHC1Q5JVL4 640 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms