RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 DUSP9Q99956 384 aaKnown RBP9.97□□□□□ -0.81
SNX13-203ENST00000428135 ABCG8Q9H221 673 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 FAM50BQ9Y247 325 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 EIF3LQ9Y262 564 aaKnown RBP9.97□□□□□ -0.81
SNX13-203ENST00000428135 RNF103O00237 685 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 PIAS1O75925 651 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 CTSEP14091 401 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 BGNP21810 368 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 POU1F1P28069 291 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 TUFMP49411 452 aaKnown RBP9.97□□□□□ -0.81
SNX13-203ENST00000428135 SERPINB8P50452 374 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 CCNG1P51959 295 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 FKBP1BP68106 108 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 SAMD3Q8N6K7 520 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 VPS37AQ8NEZ2 397 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 NDRG1Q92597 394 aaKnown RBP9.97□□□□□ -0.81
SNX13-203ENST00000428135 HAS1Q92839 578 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 C18orf25Q96B23 403 aaPredicted RBP9.97□□□□□ -0.81
SNX13-203ENST00000428135 ZNF518BQ9C0D4 1074 aa9.97□□□□□ -0.81
SNX13-203ENST00000428135 ILKAPQ9H0C8 392 aaPredicted RBP9.97□□□□□ -0.81
SNX13-203ENST00000428135 EXOSC4Q9NPD3 245 aaKnown RBP9.97□□□□□ -0.81
SNX13-203ENST00000428135 CLK2P49760 499 aaKnown RBP9.96□□□□□ -0.81
SNX13-203ENST00000428135 AMPD2Q01433 879 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 TOMM20Q15388 145 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 HSDL1Q3SXM5 330 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 SETMARQ53H47 684 aaPredicted RBP9.96□□□□□ -0.81
SNX13-203ENST00000428135 GET4Q7L5D6 327 aaPredicted RBP9.96□□□□□ -0.81
SNX13-203ENST00000428135 CFAP52Q8N1V2 620 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 SERPINB11Q96P15 392 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 NCKAP1Q9Y2A7 1128 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 CCL16O15467 120 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 ZNF189O75820 626 aaPredicted RBP9.96□□□□□ -0.81
SNX13-203ENST00000428135 IL1BP01584 269 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 EIF2S1P05198 315 aaKnown RBP9.96□□□□□ -0.81
SNX13-203ENST00000428135 SSTR1P30872 391 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 ATP5C1P36542 298 aaKnown RBP9.96□□□□□ -0.81
SNX13-203ENST00000428135 MAXP61244 160 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 SLC6A3Q01959 620 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 MMRN1Q13201 1228 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 FBXW10Q5XX13 1052 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 C16orf46Q6P387 395 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 WDR59Q6PJI9 974 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 FAM183BPQ6ZVS7 135 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 CNDP1Q96KN2 507 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 ASB7Q9H672 318 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 CAAP1Q9H8G2 361 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 DNPEPQ9ULA0 475 aa9.96□□□□□ -0.81
SNX13-203ENST00000428135 NDUFS2O75306 463 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 SPAG6O75602 509 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 PSMD10O75832 226 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 RTN3O95197 1032 aaPredicted RBP9.96□□□□□ -0.82
SNX13-203ENST00000428135 LSM8O95777 96 aaKnown RBP9.96□□□□□ -0.82
SNX13-203ENST00000428135 GSTM1P09488 218 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 RARGP13631 454 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 RABGGTBP53611 331 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 PFKPQ01813 784 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 OCA2Q04671 838 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 CACHD1Q5VU97 1274 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 EEF1DP3Q658K8 133 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 ZNF470Q6ECI4 717 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 BTNL9Q6UXG8 535 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 MTSS1LQ765P7 747 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 TNS4Q8IZW8 715 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 OR5B17Q8NGF7 314 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 UBE2OQ9C0C9 1292 aaKnown RBP9.96□□□□□ -0.82
SNX13-203ENST00000428135 CDT1Q9H211 546 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 ASAH2Q9NR71 780 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 CDY1Q9Y6F8 540 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 A0A0A6YYK5 440 aaPredicted RBP9.96□□□□□ -0.82
SNX13-203ENST00000428135 TRIM66O15016 1216 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 AP5Z1O43299 807 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 BAIAP3O94812 1187 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 SLC2A4P14672 509 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 AXLP30530 894 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 LSP1P33241 339 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 ITGA7Q13683 1181 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 KCNT2Q6UVM3 1135 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.96□□□□□ -0.82
SNX13-203ENST00000428135 MAP4K3Q8IVH8 894 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 UBA2Q9UBT2 640 aaPredicted RBP9.96□□□□□ -0.82
SNX13-203ENST00000428135 LTN1O94822 1766 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 CHUKO15111 745 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 RBL1P28749 1068 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 XRCC4Q13426 336 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 KCNA10Q16322 511 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 ATP13A4Q4VNC1 1196 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 C1orf186Q6ZWK4 172 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 LRRC34Q8IZ02 419 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 HTR3CQ8WXA8 447 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 TMEM159Q96B96 161 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 POPDC2Q9HBU9 364 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 SYTL2Q9HCH5 934 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 N6AMT1Q9Y5N5 214 aa9.96□□□□□ -0.82
SNX13-203ENST00000428135 ZNF682O95780 498 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 IGSF6O95976 241 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 CTPS1P17812 591 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 ITGB5P18084 799 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 ELK3P41970 407 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 ABL2P42684 1182 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms