RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 USP30Q70CQ3 517 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 GPRIN1Q7Z2K8 1008 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 TRAPPC11Q7Z392 1133 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 TMC6Q7Z403 805 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 ADIPOR2Q86V24 386 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 GANCQ8TET4 914 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 NOC3LQ8WTT2 800 aaKnown RBP12.48□□□□□ -0.41
DDX39B-208ENST00000428098 ANKRD36BP1Q96IX9 119 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 SERAC1Q96JX3 654 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 PABPC3Q9H361 631 aaKnown RBP12.48□□□□□ -0.41
DDX39B-208ENST00000428098 DMAP1Q9NPF5 467 aaPredicted RBP12.48□□□□□ -0.41
DDX39B-208ENST00000428098 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDX39B-208ENST00000428098 UCKL1Q9NWZ5 548 aa12.48□□□□□ -0.41
DDX39B-208ENST00000428098 AGO1Q9UL18 857 aaKnown RBP12.48□□□□□ -0.41
DDX39B-208ENST00000428098 R3HCC1Q9Y3T6 440 aaKnown RBP12.48□□□□□ -0.41
DDX39B-208ENST00000428098 LY6G6EA0A0G2JKS1 128 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 A0A1W2PQH9 124 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 CYP26A1O43174 497 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 NOBOXO60393 691 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 AP1G2O75843 785 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 LDHAP00338 332 aaKnown RBP12.47□□□□□ -0.41
DDX39B-208ENST00000428098 CKMT1AP12532 417 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 RARGP13631 454 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 GARTP22102 1010 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 HLA-FP30511 346 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 DDIT3P35638 169 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 CHKAP35790 457 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 ARID5AQ03989 594 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 GOLGA8FQ08AF8 430 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 GOLGA8DPQ0D2H9 430 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 E2F5Q15329 346 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 DUOXA2Q1HG44 320 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 WDR72Q3MJ13 1102 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 SGO2Q562F6 1265 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 C10orf120Q5SQS8 335 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 KLHDC10Q6PID8 442 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 SCD5Q86SK9 330 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 ATXN7L3BQ96GX2 97 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 ARHGAP9Q9BRR9 750 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 SLC2A11Q9BYW1 496 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 RSPH9Q9H1X1 276 aaPredicted RBP12.47□□□□□ -0.41
DDX39B-208ENST00000428098 TBC1D7Q9P0N9 293 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 PLA2G4CQ9UP65 541 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 NCKAP1Q9Y2A7 1128 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 U3KQA8 63 aa12.47□□□□□ -0.41
DDX39B-208ENST00000428098 A0A1W2PP55 124 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 TBCAO75347 108 aaKnown RBP12.46□□□□□ -0.41
DDX39B-208ENST00000428098 TNNC2P02585 160 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 HMBSP08397 361 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 CCR5P51681 352 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 CASP5P51878 434 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 MAP3K7CLP57077 242 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 ASIC1P78348 528 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 EHHADHQ08426 723 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
DDX39B-208ENST00000428098 TTC31Q49AM3 519 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-208ENST00000428098 ZNF776Q68DI1 518 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-208ENST00000428098 USP53Q70EK8 1073 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 MFSD2AQ8NA29 543 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 OR2T34Q8NGX1 318 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 OR4C6Q8NH72 309 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 DDI1Q8WTU0 396 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 RAD54LQ92698 747 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 CCDC97Q96F63 343 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-208ENST00000428098 ACCSQ96QU6 501 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 CSNK1G1Q9HCP0 422 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 KRT82Q9NSB4 513 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 ARHGAP20Q9P2F6 1191 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 SCML2Q9UQR0 700 aa12.46□□□□□ -0.41
DDX39B-208ENST00000428098 LRRC72A6NJI9 287 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 HHLA1C9JL84 531 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 CASC3O15234 703 aaKnown RBP12.45□□□□□ -0.42
DDX39B-208ENST00000428098 MID1O15344 667 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 LZTS3O60299 673 aaPredicted RBP12.45□□□□□ -0.42
DDX39B-208ENST00000428098 ITGB2P05107 769 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 CENPBP07199 599 aaPredicted RBP12.45□□□□□ -0.42
DDX39B-208ENST00000428098 TGM2P21980 687 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 DGKAP23743 735 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 CORO1AP31146 461 aaKnown RBP12.45□□□□□ -0.42
DDX39B-208ENST00000428098 DUSP3P51452 185 aaPredicted RBP12.45□□□□□ -0.42
DDX39B-208ENST00000428098 FOXK1P85037 733 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 TGIF1Q15583 401 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 TBR1Q16650 682 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 L1TD1Q5T7N2 865 aaKnown RBP12.45□□□□□ -0.42
DDX39B-208ENST00000428098 CHST9Q7L1S5 443 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 KIAA0907Q7Z7F0 614 aaPredicted RBP12.45□□□□□ -0.42
DDX39B-208ENST00000428098 CBWD2Q8IUF1 395 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 DENND1CQ8IV53 801 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 CCDC83Q8IWF9 413 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 OXR1Q8N573 874 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 GOLGA1Q92805 767 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 ELMO3Q96BJ8 720 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 HVCN1Q96D96 273 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 SMARCD1Q96GM5 515 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 MYO19Q96H55 970 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 FGFBP2Q9BYJ0 223 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 EPN3Q9H201 632 aa12.45□□□□□ -0.42
DDX39B-208ENST00000428098 FBXO44Q9H4M3 255 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms