RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RBM12Q9NTZ6 932 aaKnown RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 DNAJC17Q9NVM6 304 aaKnown RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 TAB2Q9NYJ8 693 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 THAP10Q9P2Z0 257 aaPredicted RBP9.5□□□□□ -0.89
SMC1A-203ENST00000428014 RAB23Q9ULC3 237 aa9.5□□□□□ -0.89
SMC1A-203ENST00000428014 MYO15AQ9UKN7 3530 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 CEP250Q9BV73 2442 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 A0A1W2PQJ5 194 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 NEDD8-MDP1E9PL57 170 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 AXIN1O15169 862 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 ZNF217O75362 1048 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 TRUB2O95900 331 aaKnown RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 ASLP04424 464 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 ERBB2P04626 1255 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 GZMAP12544 262 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 UNGP13051 313 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 FERP16591 822 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 HOXD9P28356 352 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 USP8P40818 1118 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 PRKCIP41743 596 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 RGS7P49802 495 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 PLK1P53350 603 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 POLR2FP61218 127 aaKnown RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 NRG1Q02297 640 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 UBXN1Q04323 297 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 ZBTB16Q05516 673 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 SYCP1Q15431 976 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 SLC25A52Q3SY17 297 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 FAM133BQ5BKY9 247 aaKnown RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 SDE2Q6IQ49 451 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 CACNA2D4Q7Z3S7 1137 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 C12orf40Q86WS4 652 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 ERICH1Q86X53 443 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 PHF13Q86YI8 300 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 DENND1CQ8IV53 801 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 AHI1Q8N157 1196 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 ZNF513Q8N8E2 541 aaPredicted RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 ATP6V0D2Q8N8Y2 350 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 WBP2Q969T9 261 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 NPY6RQ99463 290 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 PCED1AQ9H1Q7 454 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 VPS16Q9H269 839 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 AIPL1Q9NZN9 384 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 TPX2Q9ULW0 747 aaKnown RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 BZW2Q9Y6E2 419 aaKnown RBP9.49□□□□□ -0.89
SMC1A-203ENST00000428014 USP34Q70CQ2 3546 aa9.49□□□□□ -0.89
SMC1A-203ENST00000428014 CKAP5Q14008 2032 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 PRR5-ARHGAP8B1AHC4 643 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 EIF3CLB5ME19 914 aaKnown RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 PES1O00541 588 aaKnown RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 MDM4O15151 490 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 GFPT2O94808 682 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 IGLV3-19P01714 112 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 CALB1P05937 261 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 ATP5BP06576 529 aaKnown RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 FECHP22830 423 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 HOXC13P31276 330 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 SLC6A11P48066 632 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 CXCR3P49682 368 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 AIF1P55008 147 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 ARHGAP8P85298 464 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 FMO1Q01740 532 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 SULT2A1Q06520 285 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 NR1I3Q14994 352 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 USP39Q53GS9 565 aaKnown RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 MS4A13Q5J8X5 152 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 C10orf76Q5T2E6 689 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 CHST9Q7L1S5 443 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 ASCL5Q7RTU5 278 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 NOP9Q86U38 636 aaKnown RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 ALYREFQ86V81 257 aaKnown RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 CCDC117Q8IWD4 279 aaPredicted RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 AOPEPQ8N6M6 819 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 TSTD1Q8NFU3 115 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 TTC8Q8TAM2 541 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 EDEM1Q92611 657 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 TTC17Q96AE7 1141 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 EIF3CQ99613 913 aaKnown RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 NCAPGQ9BPX3 1015 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 SYT11Q9BT88 431 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 TTYH3Q9C0H2 523 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 SYNCQ9H7C4 482 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 FAM207AQ9NSI2 230 aaPredicted RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 ELOVL2Q9NXB9 296 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 ARHGEF38Q9NXL2 777 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 SFMBT1Q9UHJ3 866 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 TMEM59LQ9UK28 342 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 AJAP1Q9UKB5 411 aaPredicted RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 NUDT5Q9UKK9 219 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 SCML1Q9UN30 329 aa9.48□□□□□ -0.89
SMC1A-203ENST00000428014 SMG5Q9UPR3 1016 aaKnown RBP9.48□□□□□ -0.89
SMC1A-203ENST00000428014 IGLV3-10A0A075B6K4 115 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 A0A1B0GVM2 712 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 TCAF2A6NFQ2 919 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 ARHGAP33O14559 1287 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 ADAM23O75077 832 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 RPP40O75818 363 aaKnown RBP9.47□□□□□ -0.89
SMC1A-203ENST00000428014 RHOBTB1O94844 696 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms