RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.48□□□□□ -0.73
GACAT3-201ENST00000426539 CADM4Q8NFZ8 388 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 C1orf216Q8TAB5 229 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 WFDC5Q8TCV5 224 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 CLEC4CQ8WTT0 213 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 CYB5D2Q8WUJ1 264 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 SLC35F5Q8WV83 523 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 PRCCQ92733 491 aaPredicted RBP10.48□□□□□ -0.73
GACAT3-201ENST00000426539 SIPA1Q96FS4 1042 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 IPO9Q96P70 1041 aaKnown RBP10.48□□□□□ -0.73
GACAT3-201ENST00000426539 TMEM245Q9H330 911 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 CNGB3Q9NQW8 809 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 OLA1Q9NTK5 396 aaKnown RBP10.48□□□□□ -0.73
GACAT3-201ENST00000426539 NEUROG3Q9Y4Z2 214 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 SLCO1B1Q9Y6L6 691 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 PI4KAP42356 2102 aa10.48□□□□□ -0.73
GACAT3-201ENST00000426539 FRYQ5TBA9 3013 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 ADAMTS9Q9P2N4 1935 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 A0A1B0GTW7 788 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 PCNX2A6NKB5 2137 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 MEI4A8MW99 385 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 PIK3R2O00459 728 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 PMM2O15305 246 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 TIMM44O43615 452 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 SMC2O95347 1197 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 LATS1O95835 1130 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 FYNP06241 537 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 PAEPP09466 180 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 BMP6P22004 513 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 TBXAS1P24557 533 aaPredicted RBP10.47□□□□□ -0.73
GACAT3-201ENST00000426539 BRD2P25440 801 aaKnown RBP10.47□□□□□ -0.73
GACAT3-201ENST00000426539 SLC6A4P31645 630 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 HARS2P49590 506 aaKnown RBP10.47□□□□□ -0.73
GACAT3-201ENST00000426539 YWHAEP62258 255 aaKnown RBP10.47□□□□□ -0.73
GACAT3-201ENST00000426539 CAMK2GQ13555 558 aaPredicted RBP10.47□□□□□ -0.73
GACAT3-201ENST00000426539 FAM133BQ5BKY9 247 aaKnown RBP10.47□□□□□ -0.73
GACAT3-201ENST00000426539 ADGRF1Q5T601 910 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 DCAF12L1Q5VU92 463 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 NADSYN1Q6IA69 706 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 RFWD3Q6PCD5 774 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 TMEM270Q6UE05 265 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 SERPINA13PQ6UXR4 307 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 CHST9Q7L1S5 443 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 SIX6OS1Q8N1H7 587 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 ZCCHC9Q8N567 271 aaKnown RBP10.47□□□□□ -0.73
GACAT3-201ENST00000426539 ZNF366Q8N895 744 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 OR2T3Q8NH03 318 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 RNF139Q8WU17 664 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 SMARCE1Q969G3 411 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 TMA16Q96EY4 203 aaKnown RBP10.47□□□□□ -0.73
GACAT3-201ENST00000426539 MYEOVQ96EZ4 313 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 CCDC34Q96HJ3 373 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 LMLNQ96KR4 655 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 TIGD1Q96MW7 591 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 IL21RQ9HBE5 538 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 ABCC13Q9NSE7 274 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 ABCB8Q9NUT2 735 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 SUSD2Q9UGT4 822 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 MAN1B1Q9UKM7 699 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 KIAA1257Q9ULG3 409 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.47□□□□□ -0.73
GACAT3-201ENST00000426539 NFE2L3Q9Y4A8 694 aa10.47□□□□□ -0.73
GACAT3-201ENST00000426539 CEP295Q9C0D2 2601 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 FAM221BA6H8Z2 402 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 CBFA2T3O75081 653 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 PABPC1P11940 636 aaKnown RBP10.46□□□□□ -0.73
GACAT3-201ENST00000426539 GNSP15586 552 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 OXTRP30559 389 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 CD70P32970 193 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 ACSL1P33121 698 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 SLC14A1Q13336 389 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 CNGA2Q16280 664 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 PIK3R6Q5UE93 754 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 MBLAC2Q68D91 279 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 TTI2Q6NXR4 508 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 RAB44Q7Z6P3 723 aaPredicted RBP10.46□□□□□ -0.73
GACAT3-201ENST00000426539 FAM124AQ86V42 546 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 ARHGEF19Q8IW93 802 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 CHCHD4Q8N4Q1 142 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 WFIKKN2Q8TEU8 576 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 DHTKD1Q96HY7 919 aaPredicted RBP10.46□□□□□ -0.73
GACAT3-201ENST00000426539 PRICKLE1Q96MT3 831 aaPredicted RBP10.46□□□□□ -0.73
GACAT3-201ENST00000426539 CEP63Q96MT8 703 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 NT5C1BQ96P26 610 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 NUP58Q9BVL2 599 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 MIR1-1HGQ9H1L0 117 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 MTG2Q9H4K7 406 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 C6orf106Q9H6K1 298 aaPredicted RBP10.46□□□□□ -0.73
GACAT3-201ENST00000426539 METTL14Q9HCE5 456 aaKnown RBP10.46□□□□□ -0.73
GACAT3-201ENST00000426539 PRSS16Q9NQE7 514 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 EIF2B4Q9UI10 523 aaKnown RBP10.46□□□□□ -0.73
GACAT3-201ENST00000426539 GGA2Q9UJY4 613 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 MSRB2Q9Y3D2 182 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 PCDHB4Q9Y5E5 795 aa10.46□□□□□ -0.73
GACAT3-201ENST00000426539 CFAP47Q6ZTR5 3102 aa10.46□□□□□ -0.74
GACAT3-201ENST00000426539 CEP192Q8TEP8 1941 aa10.45□□□□□ -0.74
GACAT3-201ENST00000426539 MUC22E2RYF6 1773 aaPredicted RBP10.45□□□□□ -0.74
GACAT3-201ENST00000426539 TMEM8BA6NDV4 472 aa10.45□□□□□ -0.74
GACAT3-201ENST00000426539 SRRM3A6NNA2 597 aaPredicted RBP10.45□□□□□ -0.74
GACAT3-201ENST00000426539 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms