RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SYKP43405 635 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ARRB1P49407 418 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 MXI1P50539 228 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 RACK1P63244 317 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 BST2Q10589 180 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CETN1Q12798 172 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 RNF219Q5W0B1 726 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 NUGGCQ68CJ6 796 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 MBLAC2Q68D91 279 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ARHGAP17Q68EM7 881 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PM20D1Q6GTS8 502 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 USP30Q70CQ3 517 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 GRAMD1CQ8IYS0 662 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 KIAA0895Q8NCT3 520 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TAS1R2Q8TE23 839 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TWNKQ96RR1 684 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PPP1R9BQ96SB3 815 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TSG101Q99816 390 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 OMDQ99983 421 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TM9SF3Q9HD45 589 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CD93Q9NPY3 652 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 GGA2Q9UJY4 613 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 RCOR1Q9UKL0 485 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FNDC3AQ9Y2H6 1198 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CEP83Q9Y592 693 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 HELZP42694 1942 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CACNA1GO43497 2377 aa12.79□□□□□ -0.36
HLA-DQB3-203ENST00000425319 USP24Q9UPU5 2620 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 KLRC4O43908 158 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 LDOC1O95751 146 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CAPNS1P04632 268 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 VDRP11473 427 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ACSL1P33121 698 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ABCG1P45844 678 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 C19orf57Q0VDD7 668 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 RAB41Q5JT25 222 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TCERG1LQ5VWI1 586 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 BSPRYQ5W0U4 402 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 KIAA0895LQ68EN5 471 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 GUF1Q8N442 669 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 OXR1Q8N573 874 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SORCS1Q8WY21 1168 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 BAP1Q92560 729 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 BIRC7Q96CA5 298 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SPATA32Q96LK8 384 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 GTPBP4Q9BZE4 634 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ULBP1Q9BZM6 244 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 C6orf106Q9H6K1 298 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CNGB3Q9NQW8 809 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 AASDHPPTQ9NRN7 309 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FBXL12Q9NXK8 326 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PCDHGA1Q9Y5H4 931 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ATP6V1DQ9Y5K8 247 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 AK5Q9Y6K8 562 aa12.78□□□□□ -0.36
HLA-DQB3-203ENST00000425319 A0A1B0GVL5 298 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CAPN9O14815 690 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 VILLO15195 856 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBL1XO60907 577 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RHOBTB3O94955 611 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TRIM49P0CI25 452 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TRIM49CP0CI26 452 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SETSIPP0DME0 302 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TBXAS1P24557 533 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RPS14P62263 151 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PPP3CAQ08209 521 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 STILQ15468 1287 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 EDRF1Q3B7T1 1238 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SOWAHCQ53LP3 525 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 MFN1Q8IWA4 741 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FAM217AQ8IXS0 508 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SLC4A11Q8NBS3 891 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CYB5D2Q8WUJ1 264 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 NXPE2Q96DL1 559 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 DCBLD2Q96PD2 775 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TRIM62Q9BVG3 475 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TMEM245Q9H330 911 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 APOBEC3GQ9HC16 384 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PRSS16Q9NQE7 514 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RMND1Q9NWS8 449 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SFMBT1Q9UHJ3 866 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SLC12A6Q9UHW9 1150 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.37
HLA-DQB3-203ENST00000425319 TARSL2A2RTX5 802 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CAPN8A6NHC0 703 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 ACTN4O43707 911 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PFKFB1P16118 471 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 HOXD9P28356 352 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 HLA-FP30511 346 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 RAD23BP54727 409 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 KRT85P78386 507 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 CCDC15Q0P6D6 951 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SMAD1Q15797 465 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 SND1Q7KZF4 910 aaKnown RBP eCLIP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 PRPF39Q86UA1 669 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 KDM1BQ8NB78 822 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 C1orf216Q8TAB5 229 aa12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 BAHD1Q8TBE0 780 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB3-203ENST00000425319 KCTD13Q8WZ19 329 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms