RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 NDUFA10O95299 355 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 PDGFBP01127 241 aaPredicted RBP22.72■■□□□ 1.23
HMGA2-205ENST00000425208 SLC6A4P31645 630 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 GSE1Q14687 1217 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 UBXN2BQ14CS0 331 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 ARL13BQ3SXY8 428 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 MPPE1Q53F39 396 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 FYB2Q5VWT5 728 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 RAP1GAP2Q684P5 730 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 RFWD3Q6PCD5 774 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 DDI1Q8WTU0 396 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 PBXIP1Q96AQ6 731 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 XPO6Q96QU8 1125 aaKnown RBP22.72■■□□□ 1.23
HMGA2-205ENST00000425208 P2RY13Q9BPV8 354 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 TRIM7Q9C029 511 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 LTB4R2Q9NPC1 389 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 CTTNBP2NLQ9P2B4 639 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 UVRAGQ9P2Y5 699 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 ANAPC7Q9UJX3 599 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 INTUQ9ULD6 942 aa22.72■■□□□ 1.23
HMGA2-205ENST00000425208 EPN1Q9Y6I3 576 aaPredicted RBP22.72■■□□□ 1.23
HMGA2-205ENST00000425208 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.71■■□□□ 1.23
HMGA2-205ENST00000425208 EIF3CLB5ME19 914 aaKnown RBP22.71■■□□□ 1.23
HMGA2-205ENST00000425208 F5H5T6 163 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 TSPAN3O60637 253 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 PENKP01210 267 aaPredicted RBP22.71■■□□□ 1.23
HMGA2-205ENST00000425208 TACR2P21452 398 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 EIF2DP41214 584 aaKnown RBP22.71■■□□□ 1.23
HMGA2-205ENST00000425208 PON2Q15165 354 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 MS4A13Q5J8X5 152 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 PIK3R6Q5UE93 754 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 TMEM139Q8IV31 216 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 ZNF564Q8TBZ8 553 aaPredicted RBP22.71■■□□□ 1.23
HMGA2-205ENST00000425208 CD101Q93033 1021 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 TMA16Q96EY4 203 aaKnown RBP22.71■■□□□ 1.23
HMGA2-205ENST00000425208 NELL2Q99435 816 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 EIF3CQ99613 913 aaKnown RBP22.71■■□□□ 1.23
HMGA2-205ENST00000425208 C1QTNF1Q9BXJ1 281 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 FOXQ1Q9C009 403 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 PLK2Q9NYY3 685 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 NDRG2Q9UN36 371 aaKnown RBP22.71■■□□□ 1.23
HMGA2-205ENST00000425208 ZDBF2Q9HCK1 2354 aa22.71■■□□□ 1.23
HMGA2-205ENST00000425208 FAM86C2PA6NEL3 165 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 GFRA2O00451 464 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 CACNG3O60359 315 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 RNF8O76064 485 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 OPRD1P41143 372 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 MAGEA1P43355 309 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 ZNF252P-AS1Q0IIN9 211 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 RAB6CQ53S08 254 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 ACBD5Q5T8D3 534 aaPredicted RBP22.7■■□□□ 1.22
HMGA2-205ENST00000425208 BMP8AQ7Z5Y6 402 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 C12orf40Q86WS4 652 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 ETFBKMTQ8IXQ9 262 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 NAT16Q8N8M0 369 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 HJURPQ8NCD3 748 aaPredicted RBP22.7■■□□□ 1.22
HMGA2-205ENST00000425208 PJA1Q8NG27 643 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 RAB6CQ9H0N0 254 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 HS3ST4Q9Y661 456 aa22.7■■□□□ 1.22
HMGA2-205ENST00000425208 TARSP26639 723 aaKnown RBP22.69■■□□□ 1.22
HMGA2-205ENST00000425208 GRSF1Q12849 480 aaKnown RBP eCLIP22.69■■□□□ 1.22
HMGA2-205ENST00000425208 PREPLQ4J6C6 727 aaPredicted RBP22.69■■□□□ 1.22
HMGA2-205ENST00000425208 MPP7Q5T2T1 576 aa22.69■■□□□ 1.22
HMGA2-205ENST00000425208 NAIF1Q69YI7 327 aaPredicted RBP22.69■■□□□ 1.22
HMGA2-205ENST00000425208 CWF19L1Q69YN2 538 aaKnown RBP22.69■■□□□ 1.22
HMGA2-205ENST00000425208 SCYL2Q6P3W7 929 aa22.69■■□□□ 1.22
HMGA2-205ENST00000425208 RAD9BQ6WBX8 426 aa22.69■■□□□ 1.22
HMGA2-205ENST00000425208 SUGP1Q8IWZ8 645 aaKnown RBP22.69■■□□□ 1.22
HMGA2-205ENST00000425208 RHOT2Q8IXI1 618 aa22.69■■□□□ 1.22
HMGA2-205ENST00000425208 LGI2Q8N0V4 545 aa22.69■■□□□ 1.22
HMGA2-205ENST00000425208 PRICKLE1Q96MT3 831 aaPredicted RBP22.69■■□□□ 1.22
HMGA2-205ENST00000425208 HAPLN3Q96S86 360 aa22.69■■□□□ 1.22
HMGA2-205ENST00000425208 PRMT1Q99873 361 aaKnown RBP22.69■■□□□ 1.22
HMGA2-205ENST00000425208 C11orf16Q9NQ32 467 aa22.69■■□□□ 1.22
HMGA2-205ENST00000425208 ANLNQ9NQW6 1124 aa22.69■■□□□ 1.22
HMGA2-205ENST00000425208 DNAJC17Q9NVM6 304 aaKnown RBP22.69■■□□□ 1.22
HMGA2-205ENST00000425208 IP6K2Q9UHH9 426 aa22.69■■□□□ 1.22
HMGA2-205ENST00000425208 I6L893 689 aaPredicted RBP22.68■■□□□ 1.22
HMGA2-205ENST00000425208 MYO1FO00160 1098 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 GPR37L1O60883 481 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 TULP3O75386 442 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 HOXD9P28356 352 aaPredicted RBP22.68■■□□□ 1.22
HMGA2-205ENST00000425208 GALK1P51570 392 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 AUHQ13825 339 aaKnown RBP22.68■■□□□ 1.22
HMGA2-205ENST00000425208 PIGHQ14442 188 aaPredicted RBP22.68■■□□□ 1.22
HMGA2-205ENST00000425208 ACAP1Q15027 740 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 TMEM196Q5HYL7 178 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 CCDC112Q8NEF3 446 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 RFFLQ8WZ73 363 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 NTAN1Q96AB6 310 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 P2RY11Q96G91 374 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 PNKPQ96T60 521 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 NCAPGQ9BPX3 1015 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 OSBPL6Q9BZF3 934 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 SIK2Q9H0K1 926 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 TMPRSS4Q9NRS4 437 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 DEC1Q9P2X7 70 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 PCDHA13Q9Y5I0 950 aa22.68■■□□□ 1.22
HMGA2-205ENST00000425208 FAM170BA6NMN3 283 aa22.67■■□□□ 1.22
HMGA2-205ENST00000425208 NCAM2O15394 837 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms