RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 IGKV3-20P01619 116 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 ACAA1P09110 424 aaPredicted RBP5.46□□□□□ -1.54
LINC01040-201ENST00000425048 HOXC6P09630 235 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 ATICP31939 592 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 CIITAP33076 1130 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 STAT6P42226 847 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 RFX2P48378 723 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 RRP1P56182 461 aaKnown RBP5.46□□□□□ -1.54
LINC01040-201ENST00000425048 RPL36AP83881 106 aaKnown RBP5.46□□□□□ -1.54
LINC01040-201ENST00000425048 DMWDQ09019 674 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 SEMA3BQ13214 749 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 KIAA0753Q2KHM9 967 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 GFI1BQ5VTD9 330 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 NADSYN1Q6IA69 706 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 GSG1LQ6UXU4 331 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 CCDC149Q6ZUS6 474 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 KRT28Q7Z3Y7 464 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 OVCA2Q8WZ82 227 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 WDR24Q96S15 920 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 HEYLQ9NQ87 328 aaPredicted RBP5.46□□□□□ -1.54
LINC01040-201ENST00000425048 NOB1Q9ULX3 412 aaKnown RBP5.46□□□□□ -1.54
LINC01040-201ENST00000425048 LAMP3Q9UQV4 416 aa5.46□□□□□ -1.54
LINC01040-201ENST00000425048 A6NNZ2 444 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 COQ9O75208 318 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 PAPSS2O95340 614 aaPredicted RBP5.45□□□□□ -1.54
LINC01040-201ENST00000425048 ANXA2P07355 339 aaKnown RBP5.45□□□□□ -1.54
LINC01040-201ENST00000425048 RPL17P18621 184 aaKnown RBP5.45□□□□□ -1.54
LINC01040-201ENST00000425048 SLC8A1P32418 973 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 ACSM6Q6P461 480 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 SRGAP1Q7Z6B7 1085 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 RBM23Q86U06 439 aaKnown RBP5.45□□□□□ -1.54
LINC01040-201ENST00000425048 DDIASQ8IXT1 998 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 FAM156AQ8NDB6 213 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 ZFPM2Q8WW38 1151 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 ASB12Q8WXK4 309 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 INPP5DQ92835 1189 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 MYO6Q9UM54 1294 aa5.45□□□□□ -1.54
LINC01040-201ENST00000425048 hCG_2014768A0A024R1R8 64 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 HRGP04196 525 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 GAS1P54826 345 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 DSCR9P59020 149 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 GPS1Q13098 491 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 TMEM196Q5HYL7 178 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 WASHC2DQ5SRD0 308 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 ABLIM2Q6H8Q1 611 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 PPP4R4Q6NUP7 873 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 TLDC1Q6P9B6 456 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 LAS2Q8IYD9 372 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 CLMNQ96JQ2 1002 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 ELOVL1Q9BW60 279 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 ISCUQ9H1K1 167 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 SIRT3Q9NTG7 399 aaPredicted RBP5.44□□□□□ -1.54
LINC01040-201ENST00000425048 INSL5Q9Y5Q6 135 aa5.44□□□□□ -1.54
LINC01040-201ENST00000425048 PODXLO00592 558 aa5.43□□□□□ -1.54
LINC01040-201ENST00000425048 GAS8-AS1O95177 125 aa5.43□□□□□ -1.54
LINC01040-201ENST00000425048 IL18RAPO95256 599 aa5.43□□□□□ -1.54
LINC01040-201ENST00000425048 INO80DQ53TQ3 878 aaPredicted RBP5.43□□□□□ -1.54
LINC01040-201ENST00000425048 FAM102BQ5T8I3 360 aa5.43□□□□□ -1.54
LINC01040-201ENST00000425048 ZNF474Q6S9Z5 364 aaPredicted RBP5.43□□□□□ -1.54
LINC01040-201ENST00000425048 MORC1Q86VD1 984 aa5.43□□□□□ -1.54
LINC01040-201ENST00000425048 CLASRPQ8N2M8 674 aaKnown RBP5.43□□□□□ -1.54
LINC01040-201ENST00000425048 GLMPQ8WWB7 406 aa5.43□□□□□ -1.54
LINC01040-201ENST00000425048 PHF21BQ96EK2 531 aa5.43□□□□□ -1.54
LINC01040-201ENST00000425048 SEZ6LQ9BYH1 1024 aa5.43□□□□□ -1.54
LINC01040-201ENST00000425048 AS3MTQ9HBK9 375 aa5.43□□□□□ -1.54
LINC01040-201ENST00000425048 PRSS47A8MTI9 375 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 RHODO00212 210 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 MDM4O15151 490 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 THAP12O43422 761 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 WNT1P04628 370 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 ARP10275 920 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 PEX2P28328 305 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 FAM193AP78312 1265 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 ROR2Q01974 943 aaKnown RBP5.42□□□□□ -1.54
LINC01040-201ENST00000425048 RRAGBQ5VZM2 374 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 CCDC144NLQ6NUI1 221 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 LRIG3Q6UXM1 1119 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 LMO3Q8TAP4 145 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 CDCP1Q9H5V8 836 aa5.42□□□□□ -1.54
LINC01040-201ENST00000425048 F8W8V4 182 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 ZSCAN9O15535 394 aaPredicted RBP5.41□□□□□ -1.54
LINC01040-201ENST00000425048 CAMTA2O94983 1202 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 ZBED1O96006 694 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 KRT10P13645 584 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 CPA1P15085 419 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 GSTM5P46439 218 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 TTC39AQ5SRH9 613 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 FAXCQ5TGI0 409 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 ASPHD1Q5U4P2 390 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 PARM1Q6UWI2 310 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 CHST15Q7LFX5 561 aaPredicted RBP5.41□□□□□ -1.54
LINC01040-201ENST00000425048 C7orf57Q8NEG2 295 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 WFIKKN2Q8TEU8 576 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 SLITRK1Q96PX8 696 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 SLC8A2Q9UPR5 921 aa5.41□□□□□ -1.54
LINC01040-201ENST00000425048 GAGE12JA6NER3 117 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 OR6C75A6NL08 312 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 KLKB1P03952 638 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 RFPL3SP0C7P2 107 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 IGBP1P78318 339 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms