RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 SLC2A11Q9BYW1 496 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 PARVAQ9NVD7 372 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 SLC27A6Q9Y2P4 619 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 WDFY4Q6ZS81 3184 aa19.15■□□□□ 0.66
HDAC6-205ENST00000423941 TMEM191CA6NGB0 347 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-205ENST00000423941 EGFP01133 1207 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 MYBL1P10243 752 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 FECHP22830 423 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 HOXD9P28356 352 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-205ENST00000423941 ZNF143P52747 638 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-205ENST00000423941 DEUP1Q05D60 604 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 NME3Q13232 169 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 LRRC32Q14392 662 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 C5orf22Q49AR2 442 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 MS4A13Q5J8X5 152 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 SH3PXD2AQ5TCZ1 1133 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 DNAJC24Q6P3W2 148 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 NAT16Q8N8M0 369 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 DTWD2Q8NBA8 298 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 MYEOVQ96EZ4 313 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 TRIM11Q96F44 468 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 PRICKLE1Q96MT3 831 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-205ENST00000423941 XPO6Q96QU8 1125 aaKnown RBP19.14■□□□□ 0.65
HDAC6-205ENST00000423941 DDX50Q9BQ39 737 aaKnown RBP19.14■□□□□ 0.65
HDAC6-205ENST00000423941 KCNH6Q9H252 994 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 WDCPQ9H6R7 721 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 RBM12Q9NTZ6 932 aaKnown RBP19.14■□□□□ 0.65
HDAC6-205ENST00000423941 ZNHIT6Q9NWK9 470 aaKnown RBP19.14■□□□□ 0.65
HDAC6-205ENST00000423941 DEC1Q9P2X7 70 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 SLC12A6Q9UHW9 1150 aa19.14■□□□□ 0.65
HDAC6-205ENST00000423941 ATG2BQ96BY7 2078 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 TRIM24O15164 1050 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 KAT7O95251 611 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 ADCY5O95622 1261 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 CYBBP04839 570 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 ABCB4P21439 1286 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 GPD1P21695 349 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 CDC25BP30305 580 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 SDC4P31431 198 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 RDXP35241 583 aaKnown RBP19.13■□□□□ 0.65
HDAC6-205ENST00000423941 GRIA2P42262 883 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 TNFRSF4P43489 277 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 SGSHP51688 502 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 ATXN1P54253 815 aaKnown RBP19.13■□□□□ 0.65
HDAC6-205ENST00000423941 OGDHQ02218 1023 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 TSR1Q2NL82 804 aaKnown RBP19.13■□□□□ 0.65
HDAC6-205ENST00000423941 C15orf59Q2T9L4 293 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-205ENST00000423941 PREPLQ4J6C6 727 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-205ENST00000423941 RAB6CQ53S08 254 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 RFWD3Q6PCD5 774 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 KIAA0907Q7Z7F0 614 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-205ENST00000423941 SFTPA1Q8IWL2 248 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 ZNF683Q8IZ20 524 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 FNIP1Q8TF40 1166 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 C1orf74Q96LT6 269 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.13■□□□□ 0.65
HDAC6-205ENST00000423941 RAB6CQ9H0N0 254 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 ARHGEF4Q9NR80 690 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 PLK2Q9NYY3 685 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 CLEC4EQ9ULY5 219 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 STARD13Q9Y3M8 1113 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 PAXBP1Q9Y5B6 917 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 CACNA1IQ9P0X4 2223 aa19.13■□□□□ 0.65
HDAC6-205ENST00000423941 DOCK4Q8N1I0 1966 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 CHURC1-FNTBB4DL54 471 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 GALR2O43603 387 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-205ENST00000423941 TSPAN3O60637 253 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 HDAC4P56524 1084 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 ATP11AP98196 1134 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 ACBD5Q5T8D3 534 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-205ENST00000423941 TERB1Q8NA31 727 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 DDI1Q8WTU0 396 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 LMLNQ96KR4 655 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 MCEEQ96PE7 176 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 HAPLN3Q96S86 360 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 CNPY3Q9BT09 278 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 TKTL2Q9H0I9 626 aa19.12■□□□□ 0.65
HDAC6-205ENST00000423941 NHEJ1Q9H9Q4 299 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-205ENST00000423941 DNAJC17Q9NVM6 304 aaKnown RBP19.12■□□□□ 0.65
HDAC6-205ENST00000423941 CNOT8Q9UFF9 292 aaKnown RBP19.12■□□□□ 0.65
HDAC6-205ENST00000423941 MYO18AQ92614 2054 aaKnown RBP19.12■□□□□ 0.65
HDAC6-205ENST00000423941 SYNJ2BP-COX16A0A087WUM0 186 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 ANKRD62A6NC57 917 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 ATMINO43313 823 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-205ENST00000423941 PAGE1O75459 146 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 MOCS2O96007 188 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-205ENST00000423941 APODP05090 189 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 CYP1A2P05177 515 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 TACR2P21452 398 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 KIR2DL1P43626 348 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-205ENST00000423941 DGKGP49619 791 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 GALCP54803 685 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 GFPT1Q06210 699 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-205ENST00000423941 ZNF252P-AS1Q0IIN9 211 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 CCDC122Q5T0U0 273 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 GRAMD4Q6IC98 578 aa19.11■□□□□ 0.65
HDAC6-205ENST00000423941 SND1Q7KZF4 910 aaKnown RBP eCLIP19.11■□□□□ 0.65
HDAC6-205ENST00000423941 MAML2Q8IZL2 1156 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-205ENST00000423941 SPEM1Q8N4L4 309 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms