RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NPC1O15118 1278 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 AP5Z1O43299 807 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 MED7O43513 233 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 ACSL4O60488 711 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 ZNF217O75362 1048 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 ADRB1P08588 477 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 PON1P27169 355 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 ZNF445P59923 1031 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 RING1Q06587 406 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 PDCLQ13371 301 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 MEA1Q16626 185 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 ZSCAN23Q3MJ62 389 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 TRIM61Q5EBN2 209 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 SPDYCQ5MJ68 293 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 PIK3R6Q5UE93 754 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 SYPL2Q5VXT5 272 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 PEAR1Q5VY43 1037 aaPredicted RBP15.79■□□□□ 0.12
USB1-202ENST00000423271 NUGGCQ68CJ6 796 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 SLC36A4Q6YBV0 504 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 TAC4Q86UU9 113 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 CACUL1Q86Y37 369 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 SLC41A1Q8IVJ1 513 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 FAM114A1Q8IWE2 563 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 STK32AQ8WU08 396 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 CYB5D2Q8WUJ1 264 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 DDX1Q92499 740 aaKnown RBP15.79■□□□□ 0.12
USB1-202ENST00000423271 SHC3Q92529 594 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 PRICKLE1Q96MT3 831 aaPredicted RBP15.79■□□□□ 0.12
USB1-202ENST00000423271 LSM14BQ9BX40 385 aaKnown RBP15.79■□□□□ 0.12
USB1-202ENST00000423271 SIX2Q9NPC8 291 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 ABCB8Q9NUT2 735 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 EVLQ9UI08 416 aaPredicted RBP15.79■□□□□ 0.12
USB1-202ENST00000423271 PILRBQ9UKJ0 227 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 ASCC3Q8N3C0 2202 aaKnown RBP15.79■□□□□ 0.12
USB1-202ENST00000423271 CHD8Q9HCK8 2581 aa15.79■□□□□ 0.12
USB1-202ENST00000423271 GTPBP10A4D1E9 387 aaKnown RBP15.78■□□□□ 0.12
USB1-202ENST00000423271 CDX4O14627 284 aaPredicted RBP15.78■□□□□ 0.12
USB1-202ENST00000423271 SART1O43290 800 aaKnown RBP15.78■□□□□ 0.12
USB1-202ENST00000423271 TBL1XO60907 577 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 EPHX1P07099 455 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 PNMA6AP0CW24 399 aaPredicted RBP15.78■□□□□ 0.12
USB1-202ENST00000423271 HLA-EP13747 358 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 ACADSBP45954 432 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 SLC11A2P49281 568 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 COPAP53621 1224 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 ZNF33AQ06730 810 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 MAN2A1Q16706 1144 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 SERPINA13PQ6UXR4 307 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 CHST9Q7L1S5 443 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 TMEM110Q86TL2 294 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 ADIPOR2Q86V24 386 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 PASD1Q8IV76 773 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 UNC45BQ8IWX7 931 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 ZNF366Q8N895 744 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.78■□□□□ 0.12
USB1-202ENST00000423271 SLC39A13Q96H72 371 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 HSPA12BQ96MM6 686 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 SERPINB11Q96P15 392 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 NUCKS1Q9H1E3 243 aaKnown RBP15.78■□□□□ 0.12
USB1-202ENST00000423271 PRDM16Q9HAZ2 1276 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 TMEM9BQ9NQ34 198 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 FSCN3Q9NQT6 498 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 XPO7Q9UIA9 1087 aaKnown RBP15.78■□□□□ 0.12
USB1-202ENST00000423271 GGA2Q9UJY4 613 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 ADAMTS9Q9P2N4 1935 aa15.78■□□□□ 0.12
USB1-202ENST00000423271 KCNJ18B7U540 433 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 SYNCRIPO60506 623 aaKnown RBP15.77■□□□□ 0.12
USB1-202ENST00000423271 MOCS2O96007 188 aaPredicted RBP15.77■□□□□ 0.12
USB1-202ENST00000423271 PABPC1P11940 636 aaKnown RBP15.77■□□□□ 0.12
USB1-202ENST00000423271 CD70P32970 193 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 PITX1P78337 314 aaPredicted RBP15.77■□□□□ 0.12
USB1-202ENST00000423271 MYL5Q02045 173 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 ARID5AQ03989 594 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 NNTQ13423 1086 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 KCNJ12Q14500 433 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 TAF5Q15542 800 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 MIIPQ5JXC2 388 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 CDKAL1Q5VV42 579 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 KIAA0907Q7Z7F0 614 aaPredicted RBP15.77■□□□□ 0.12
USB1-202ENST00000423271 TMPRSS6Q8IU80 811 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 WDTC1Q8N5D0 677 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 AOPEPQ8N6M6 819 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 WFIKKN2Q8TEU8 576 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 FAM81BQ96LP2 452 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 FANCLQ9NW38 375 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 STIM2Q9P246 746 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 USP36Q9P275 1121 aaKnown RBP15.77■□□□□ 0.12
USB1-202ENST00000423271 TLR6Q9Y2C9 796 aa15.77■□□□□ 0.12
USB1-202ENST00000423271 PCDH15Q96QU1 1955 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 CAPN9O14815 690 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 IRAK2O43187 625 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 TIMM44O43615 452 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 KCNK5O95279 499 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 CFIP05156 583 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 CD6P30203 668 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 MAPK8P45983 427 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 RPS24P62847 133 aaKnown RBP15.76■□□□□ 0.11
USB1-202ENST00000423271 NCAPHQ15003 741 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 PTPRNQ16849 979 aa15.76■□□□□ 0.11
USB1-202ENST00000423271 FNDC3BQ53EP0 1204 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms