RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TBL1XO60907 577 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 KAT7O95251 611 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 MYBL1P10243 752 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 TACR2P21452 398 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 SLC6A4P31645 630 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 GRIA2P42262 883 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 RPS9P46781 194 aaKnown RBP16.33■□□□□ 0.2
BRAT1-202ENST00000421712 DGKGP49619 791 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 CXCR3P49682 368 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 ATXN1P54253 815 aaKnown RBP16.33■□□□□ 0.2
BRAT1-202ENST00000421712 GFPT1Q06210 699 aaPredicted RBP16.33■□□□□ 0.2
BRAT1-202ENST00000421712 MTA1Q13330 715 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 FZD5Q13467 585 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 MAMLD1Q13495 774 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 EIF4EBP2Q13542 120 aaPredicted RBP16.33■□□□□ 0.2
BRAT1-202ENST00000421712 CCINQ13939 588 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 CCDC14Q49A88 953 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 FBXO43Q4G163 708 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 FAM133BQ5BKY9 247 aaKnown RBP16.33■□□□□ 0.2
BRAT1-202ENST00000421712 BRMS1LQ5PSV4 323 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 PIK3R6Q5UE93 754 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 FYB2Q5VWT5 728 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 NADSYN1Q6IA69 706 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 ETFBKMTQ8IXQ9 262 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 ZNF687Q8N1G0 1237 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 NT5C3BQ969T7 300 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 PGAP3Q96FM1 320 aaPredicted RBP16.33■□□□□ 0.2
BRAT1-202ENST00000421712 CHP1Q99653 195 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 SIK2Q9H0K1 926 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 ISCUQ9H1K1 167 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 MRPL47Q9HD33 250 aaKnown RBP16.33■□□□□ 0.2
BRAT1-202ENST00000421712 CALCOCO1Q9P1Z2 691 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 HCN4Q9Y3Q4 1203 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 SSU72P8A0A1W2PR75 194 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 TRIM24O15164 1050 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 ADCY5O95622 1261 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 PENKP01210 267 aaPredicted RBP16.32■□□□□ 0.2
BRAT1-202ENST00000421712 RPL7AP62424 266 aaKnown RBP16.32■□□□□ 0.2
BRAT1-202ENST00000421712 ARID5BQ14865 1188 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 MS4A13Q5J8X5 152 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 SH3PXD2AQ5TCZ1 1133 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 OTUD1Q5VV17 481 aaPredicted RBP16.32■□□□□ 0.2
BRAT1-202ENST00000421712 FAM131BQ86XD5 332 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 SYNPOQ8N3V7 929 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 HJURPQ8NCD3 748 aaPredicted RBP16.32■□□□□ 0.2
BRAT1-202ENST00000421712 CCDC26Q8TAB7 109 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 FAM172AQ8WUF8 416 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 ADAM33Q9BZ11 813 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 CHRDQ9H2X0 955 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 NHEJ1Q9H9Q4 299 aaPredicted RBP16.32■□□□□ 0.2
BRAT1-202ENST00000421712 DLGAP2Q9P1A6 1054 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 SCINQ9Y6U3 715 aa16.32■□□□□ 0.2
BRAT1-202ENST00000421712 TCRBV5S1A1TA0A578 114 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 LAMTOR5O43504 91 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 RNF40O75150 1001 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 PAGE1O75459 146 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 PSMA2P25787 234 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 PTPN9P43378 593 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 SGSHP51688 502 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 ZNF143P52747 638 aaPredicted RBP16.31■□□□□ 0.2
BRAT1-202ENST00000421712 RPS24P62847 133 aaKnown RBP16.31■□□□□ 0.2
BRAT1-202ENST00000421712 MTAPQ13126 283 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
BRAT1-202ENST00000421712 SLC18A3Q16572 532 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 ARL13BQ3SXY8 428 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 C2orf27AQ580R0 203 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 C10orf76Q5T2E6 689 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 PLEKHA7Q6IQ23 1121 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 SCYL2Q6P3W7 929 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 Q6ZS52 159 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 STRADAQ7RTN6 431 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 C1orf210Q8IVY1 113 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 CFAP52Q8N1V2 620 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 TC2NQ8N9U0 490 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 SPC24Q8NBT2 197 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 THAP2Q9H0W7 228 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 ARHGEF38Q9NXL2 777 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 HS3ST4Q9Y661 456 aa16.31■□□□□ 0.2
BRAT1-202ENST00000421712 K7EQS6 105 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 CCP110O43303 1012 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 GALR2O43603 387 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-202ENST00000421712 ATG13O75143 517 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 HOXD9P28356 352 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-202ENST00000421712 TIE1P35590 1138 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 GGCXP38435 758 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 TNFRSF4P43489 277 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 NUBP1P53384 320 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 GALCP54803 685 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 MESP2Q0VG99 397 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 AUHQ13825 339 aaKnown RBP16.3■□□□□ 0.2
BRAT1-202ENST00000421712 RABGAP1LQ5R372 815 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 PPP1R15BQ5SWA1 713 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 MPP7Q5T2T1 576 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 SFTPA1Q8IWL2 248 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 CARNMT1Q8N4J0 409 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 TERB1Q8NA31 727 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 RPLP0P6Q8NHW5 317 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 P2RY11Q96G91 374 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 PRICKLE1Q96MT3 831 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-202ENST00000421712 RPRD1AQ96P16 312 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms