RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 AMHP03971 560 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ATP2A2P16615 1042 aaKnown RBP9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ERCC2P18074 760 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 DRD4P21917 467 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 GEMIN4P57678 1058 aaKnown RBP9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 TPI1P60174 286 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 PPIDQ08752 370 aaKnown RBP9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 GALNT2Q10471 571 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 WASHC5Q12768 1159 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 SMARCB1Q12824 385 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 NME3Q13232 169 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 PPP2R5DQ14738 602 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ANKRD20A2Q5SQ80 823 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 VARS2Q5ST30 1063 aaKnown RBP9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM72AQ5TYM5 149 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ANKRD20A1Q5TYW2 823 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ANKRD20A3Q5VUR7 823 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 STEAP4Q687X5 459 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM72DQ6L9T8 149 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ZNF280DQ6N043 979 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ARHGEF18Q6ZSZ5 1173 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 B4GALNT4Q76KP1 1039 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ANKRD33Q7Z3H0 272 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 CTU1Q7Z7A3 348 aaKnown RBP9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 SCD5Q86SK9 330 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM72BQ86X60 149 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 NPAS4Q8IUM7 802 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ANKMY2Q8IV38 441 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 IGDCC3Q8IVU1 814 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 CNPY4Q8N129 248 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 AGGF1Q8N302 714 aaeCLIP9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 DBF4BQ8NFT6 615 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ZNF473Q8WTR7 871 aaKnown RBP9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 HDAC11Q96DB2 347 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 HAPLN3Q96S86 360 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 EPAS1Q99814 870 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 SELENOSQ9BQE4 189 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 MRPL9Q9BYD2 267 aaKnown RBP9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 PRDM12Q9H4Q4 367 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 PLAC1Q9HBJ0 212 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 COMMD8Q9NX08 183 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 DNAJB4Q9UDY4 337 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 ADAM28Q9UKQ2 775 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 TTLL3Q9Y4R7 772 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 PTPRSQ13332 1948 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 MYLKQ15746 1914 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 OBSL1O75147 1896 aa9.34□□□□□ -0.91
LINCMD1-201ENST00000418518 DNAH12Q6ZR08 3092 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 DENND4CQ5VZ89 1909 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 TCRBV9S1A1TA0A576 114 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 RASA4BC9J798 803 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 RNF103O00237 685 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 TRDMT1O14717 391 aaKnown RBP9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 MTSS1O43312 755 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 RASA4O43374 803 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 STK10O94804 968 aaKnown RBP9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 MAP3K6O95382 1288 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 MX2P20592 715 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 PRKCHP24723 683 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 SSTR1P30872 391 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 STX2P32856 288 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 SERPINB6P35237 376 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 ELK3P41970 407 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 OR1G1P47890 313 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 SEC24CP53992 1094 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 YWHAGP61981 247 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 ELAVL2Q12926 359 aaKnown RBP9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 MPP2Q14168 576 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 TMED2Q15363 201 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 TCTN1Q2MV58 587 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 SLC39A12Q504Y0 691 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 C1orf53Q5VUE5 145 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 C3orf62Q6ZUJ4 267 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 CYS1Q717R9 158 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 ARHGAP18Q8N392 663 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 SCAMP5Q8TAC9 235 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 DENND1AQ8TEH3 1009 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 FBF1Q8TES7 1133 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 DCAKDQ8WVC6 231 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 SLC44A1Q8WWI5 657 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 EDEM1Q92611 657 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 CHMP6Q96FZ7 201 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 P2RY11Q96G91 374 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 SGSM3Q96HU1 749 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 SIGLEC10Q96LC7 697 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 CEP295NLQ96MC4 621 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 FAM193BQ96PV7 902 aaPredicted RBP9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 CYTH2Q99418 400 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 PAFAH2Q99487 392 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 LGMNQ99538 433 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 FERMT1Q9BQL6 677 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 WDCPQ9H6R7 721 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 PPANQ9NQ55 473 aaKnown RBP9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 FNIP2Q9P278 1114 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 ZNF180Q9UJW8 692 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 CHMP2BQ9UQN3 213 aa9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 PRG3Q9Y2Y8 225 aaPredicted RBP9.33□□□□□ -0.92
LINCMD1-201ENST00000418518 TRIM17Q9Y577 477 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms