RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CDK17Q00537 523 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 MESP2Q0VG99 397 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 MTAPQ13126 283 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 ANO4Q32M45 955 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 FBXO43Q4G163 708 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 ADGRF1Q5T601 910 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 FAM102AQ5T9C2 384 aaPredicted RBP10.93□□□□□ -0.66
RFC1-203ENST00000418436 OTUD1Q5VV17 481 aaPredicted RBP10.93□□□□□ -0.66
RFC1-203ENST00000418436 FYB2Q5VWT5 728 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 HGSNATQ68CP4 663 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 SARM1Q6SZW1 724 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 MMS22LQ6ZRQ5 1243 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 TPGS1Q6ZTW0 290 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 ZNF571Q7Z3V5 609 aaPredicted RBP10.93□□□□□ -0.66
RFC1-203ENST00000418436 C1orf210Q8IVY1 113 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 MAML2Q8IZL2 1156 aaPredicted RBP10.93□□□□□ -0.66
RFC1-203ENST00000418436 SLC30A5Q8TAD4 765 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 ADAM32Q8TC27 787 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 PNKPQ96T60 521 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 NPY6RQ99463 290 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 BBS2Q9BXC9 721 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 HAUS4Q9H6D7 363 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.93□□□□□ -0.66
RFC1-203ENST00000418436 RRN3Q9NYV6 651 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 RAPGEFL1Q9UHV5 662 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 FBXO10Q9UK96 956 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 CACNA1IQ9P0X4 2223 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 ATG2BQ96BY7 2078 aa10.93□□□□□ -0.66
RFC1-203ENST00000418436 TCRBV5S1A1TA0A578 114 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 KCNU1A8MYU2 1149 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 CHURC1-FNTBB4DL54 471 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 NEDD8-MDP1E9PL57 170 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 K7EQS6 105 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 AP5Z1O43299 807 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 ACSL4O60488 711 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 KAT7O95251 611 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 CISD3P0C7P0 127 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 TNFAIP3P21580 790 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 GBP1P32455 592 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 FLT3P36888 993 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 GRIA2P42262 883 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 NSFP46459 744 aaKnown RBP10.92□□□□□ -0.66
RFC1-203ENST00000418436 SLC11A2P49281 568 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 FAM133BQ5BKY9 247 aaKnown RBP10.92□□□□□ -0.66
RFC1-203ENST00000418436 RNF43Q68DV7 783 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 SPECC1LQ69YQ0 1117 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 ACAD10Q6JQN1 1059 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 TRNP1Q6NT89 227 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 Q6ZS52 159 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 MON1BQ7L1V2 547 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 BNIPLQ7Z465 357 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 VSTM4Q8IW00 320 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 SPEM1Q8N4L4 309 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 NAT16Q8N8M0 369 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 PGAP3Q96FM1 320 aaPredicted RBP10.92□□□□□ -0.66
RFC1-203ENST00000418436 XPO6Q96QU8 1125 aaKnown RBP10.92□□□□□ -0.66
RFC1-203ENST00000418436 C11orf70Q9BRQ4 267 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 RBSNQ9H1K0 784 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 TMEM51Q9NW97 253 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 SPATA6Q9NWH7 488 aaPredicted RBP10.92□□□□□ -0.66
RFC1-203ENST00000418436 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.92□□□□□ -0.66
RFC1-203ENST00000418436 ADAM22Q9P0K1 906 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 DEC1Q9P2X7 70 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 LUC7L2Q9Y383 392 aaKnown RBP10.92□□□□□ -0.66
RFC1-203ENST00000418436 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.92□□□□□ -0.662e-7■■□□□ 14.5
RFC1-203ENST00000418436 BZW2Q9Y6E2 419 aaKnown RBP10.92□□□□□ -0.66
RFC1-203ENST00000418436 FANCMQ8IYD8 2048 aa10.92□□□□□ -0.66
RFC1-203ENST00000418436 FAM170AA1A519 330 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 GOLGA8SH3BPF8 625 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 M0QYT0 321 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 TRIM24O15164 1050 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 ENDOD1O94919 500 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 PAPSS2O95340 614 aaPredicted RBP10.91□□□□□ -0.66
RFC1-203ENST00000418436 APODP05090 189 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 CALB1P05937 261 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 SLC2A3P11169 496 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 GZMAP12544 262 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 SKILP12757 684 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 SLC6A4P31645 630 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 HNRNPH3P31942 346 aaKnown RBP10.91□□□□□ -0.66
RFC1-203ENST00000418436 CASP14P31944 242 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 TNFRSF4P43489 277 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 RNASE9P60153 205 aaKnown RBP10.91□□□□□ -0.66
RFC1-203ENST00000418436 KLHL30Q0D2K2 578 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 PPP2R5DQ14738 602 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 ARID5BQ14865 1188 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 ANGPT1Q15389 498 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 SLC25A52Q3SY17 297 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 PREPLQ4J6C6 727 aaPredicted RBP10.91□□□□□ -0.66
RFC1-203ENST00000418436 MPPE1Q53F39 396 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 ZC3H12AQ5D1E8 599 aaKnown RBP10.91□□□□□ -0.66
RFC1-203ENST00000418436 NADSYN1Q6IA69 706 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 PPP1R2P3Q6NXS1 205 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 GAS2L3Q86XJ1 694 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 MCOLN2Q8IZK6 566 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 C3orf20Q8ND61 904 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 CCDC26Q8TAB7 109 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 CPLX3Q8WVH0 158 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 VCPIP1Q96JH7 1222 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms