RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 CTNNAL1Q9UBT7 734 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 NDOR1Q9UHB4 597 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 ZSCAN5CA6NGD5 496 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 PTPN1P18031 435 aaKnown RBP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 MIPP30301 263 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 CD52P31358 61 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 ELAVL2Q12926 359 aaKnown RBP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 AGGF1Q8N302 714 aaeCLIP10.88□□□□□ -0.67
COL12A1-203ENST00000416123 RIC1Q4ADV7 1423 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 ETS1P14921 441 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 OMDQ99983 421 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 CAAP1Q9H8G2 361 aa10.88□□□□□ -0.67
COL12A1-203ENST00000416123 RGPD2P0DJD1 1756 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 PDZK1P1A8MUH7 402 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 AP5Z1O43299 807 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 SSTR1P30872 391 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 AQP5P55064 265 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 FKBP1AP62942 108 aaKnown RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 SLC6A3Q01959 620 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 SETMARQ53H47 684 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 HTR3CQ8WXA8 447 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 MTMR8Q96EF0 704 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 MYH15Q9Y2K3 1946 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 XYLBO75191 536 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 GLI1P08151 1106 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 SLC2A4P14672 509 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 ELNP15502 786 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 NR6A1Q15406 480 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 RAP1GAP2Q684P5 730 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 RGL4Q8IZJ4 473 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 PPP1R10Q96QC0 940 aaKnown RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 RBBP8Q99708 897 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 KRT84Q9NSB2 600 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 PEX10O60683 326 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 BAIAP3O94812 1187 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 GLRA2P23416 452 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 BCL2L1Q07817 233 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 NFYCQ13952 458 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 CYLC2Q14093 348 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 PIK3R5Q8WYR1 880 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 RSPH1Q8WYR4 309 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 KAT5Q92993 513 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 FAR2Q96K12 515 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 IMPAD1Q9NX62 359 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 MARCH2Q9P0N8 246 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 MAN1A2O60476 641 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 TNNI3P19429 210 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 ELK3P41970 407 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 IRAK1P51617 712 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 CCNG2Q16589 344 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 EFL1Q7Z2Z2 1120 aaKnown RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 SYTL1Q8IYJ3 562 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 IL31RAQ8NI17 732 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 SPACA7Q96KW9 195 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 MAGEB18Q96M61 343 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 DCLK3Q9C098 648 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 ACTR8Q9H981 624 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 RGS18Q9NS28 235 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 TAS2R14Q9NYV8 317 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 MEIS2O14770 477 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 CDKAL1Q5VV42 579 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 FAM183BPQ6ZVS7 135 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 MARK2Q7KZI7 788 aaKnown RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 CCDC126Q96EE4 140 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 SERPINB11Q96P15 392 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 BPIFA1Q9NP55 256 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 ZNF112Q9UJU3 913 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 WDR47O94967 919 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 SLC1A6P48664 564 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 VN1R5Q7Z5H4 357 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 MRPL9Q9BYD2 267 aaKnown RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 SMNDC1O75940 238 aaKnown RBP eCLIP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 PSMA4P25789 261 aaKnown RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 POU1F1P28069 291 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 RHBDL3P58872 404 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 IL17AQ16552 155 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 NETO2Q8NC67 525 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 CASP10Q92851 521 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 FRMD8Q9BZ67 464 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 UXTQ9UBK9 157 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-203ENST00000416123 DPP7Q9UHL4 492 aa10.87□□□□□ -0.67
COL12A1-203ENST00000416123 F8VP50 259 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 FAM107AO95990 144 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 ZSCAN5DPP0CG00 497 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 ATP6V1B1P15313 513 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 RENBPP51606 427 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 UGCGQ16739 394 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 ATP6AP1LQ52LC2 224 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 TMEM154Q6P9G4 183 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 BRSK2Q8IWQ3 736 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 ELOVL6Q9H5J4 265 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 CCDC88AQ3V6T2 1871 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 ADGRB2O60241 1585 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 MEI4A8MW99 385 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 RBAK-RBAKDNI3L0D1 243 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 VAPBO95292 243 aa10.86□□□□□ -0.67
COL12A1-203ENST00000416123 RPS7P62081 194 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms