RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 TTI1O43156 1089 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 MOCS2O96007 188 aaPredicted RBP14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 ITGAVP06756 1048 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 GABRR2P28476 465 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 SERPINB6P35237 376 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 KCNJ1P48048 391 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 VCPP55072 806 aaKnown RBP14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 SEMA3BQ13214 749 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 XRCC4Q13426 336 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 TTC27Q6P3X3 843 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 DARS2Q6PI48 645 aaKnown RBP14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 JAMLQ86YT9 394 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 PQLC3Q8N755 202 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 SLC22A17Q8WUG5 538 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 RSAD2Q8WXG1 361 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 NKD2Q969F2 451 aaPredicted RBP14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 AZIN2Q96A70 460 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 TBC1D31Q96DN5 1066 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 CDCA3Q99618 268 aaPredicted RBP14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 DDX50Q9BQ39 737 aaKnown RBP14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 ERP44Q9BS26 406 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 EPC1Q9H2F5 836 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 TLE6Q9H808 572 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 TMPRSS4Q9NRS4 437 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 ZDHHC7Q9NXF8 308 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 DMGDHQ9UI17 866 aaKnown RBP14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 HEY1Q9Y5J3 304 aa14.74□□□□□ -0.05
HMGA1P1-201ENST00000415560 CFAP69A5D8W1 941 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 SOBPA7XYQ1 873 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 H7C0C1 242 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 NCAM2O15394 837 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 CCL16O15467 120 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 COCHO43405 550 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 HMBSP08397 361 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 SRGAP2BP0DMP2 458 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 RBP3P10745 1247 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 MBL2P11226 248 aaPredicted RBP14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 MYL4P12829 197 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 ERCC2P18074 760 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 HDCP19113 662 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 DDX6P26196 483 aaKnown RBP eCLIP14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 EPHB2P29323 1055 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 ACTN2P35609 894 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 PTGIRP43119 386 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 ATP5OP48047 213 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 SLC11A2P49281 568 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 DRG2P55039 364 aaKnown RBP14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 CUL1Q13616 776 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 NOMO1Q15155 1222 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 ARHGAP15Q53QZ3 475 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 TMCO3Q6UWJ1 677 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 SPRED2Q7Z698 418 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 LZTR1Q8N653 840 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 CCDC89Q8N998 374 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 EIF1ADQ8N9N8 165 aaKnown RBP14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 BBOF1Q8ND07 529 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 SLC35B2Q8TB61 432 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 ATG4AQ8WYN0 398 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 CORO1BQ9BR76 489 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 MAGEB5Q9BZ81 275 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 ATXN3LQ9H3M9 355 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 RETREG1Q9H6L5 497 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 TRPC7Q9HCX4 862 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 GDF3Q9NR23 364 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 ARHGEF4Q9NR80 690 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 ZMYM5Q9UJ78 669 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 DNPEPQ9ULA0 475 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 HS3ST4Q9Y661 456 aa14.73□□□□□ -0.05
HMGA1P1-201ENST00000415560 ANAPC1Q9H1A4 1944 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 CCDC151A5D8V7 595 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 HACD1B0YJ81 288 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 SGK1O00141 431 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 ZNF197O14709 1029 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 LRIG2O94898 1065 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 OAS1P00973 400 aaKnown RBP14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 IGLV3-27P01718 113 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 KRT14P02533 472 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 POU2F2P09086 479 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 TNFRSF8P28908 595 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 SMAD3P84022 425 aaKnown RBP14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 DPYSQ14117 519 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 PAFAH1B3Q15102 231 aaKnown RBP14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 PDK1Q15118 436 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 RWDD4Q6NW29 188 aaKnown RBP14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 CCNI2Q6ZMN8 369 aaPredicted RBP14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 RBM23Q86U06 439 aaKnown RBP14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 CDKL3Q8IVW4 592 aaPredicted RBP14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 IFT81Q8WYA0 676 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 TIFAQ96CG3 184 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 PNKPQ96T60 521 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 BRD8Q9H0E9 1235 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 IL21Q9HBE4 155 aa14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 ZNF334Q9HCZ1 680 aaPredicted RBP14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 PPARGC1AQ9UBK2 798 aaKnown RBP14.72□□□□□ -0.05
HMGA1P1-201ENST00000415560 DENND4CQ5VZ89 1909 aa14.71□□□□□ -0.05
HMGA1P1-201ENST00000415560 TRAV19A0A0A6YYK7 116 aa14.71□□□□□ -0.05
HMGA1P1-201ENST00000415560 E9PAM4 449 aa14.71□□□□□ -0.05
HMGA1P1-201ENST00000415560 FAM72CH0Y354 149 aa14.71□□□□□ -0.05
HMGA1P1-201ENST00000415560 PPP1R12AO14974 1030 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms