RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 DRGXA6NNA5 263 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 ANHXE9PGG2 379 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 FAM72CH0Y354 149 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 CES2O00748 559 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 ACSL4O60488 711 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 KDELR1P24390 212 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 HTR7P34969 479 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 RWDD2BP57060 319 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 COPS2P61201 443 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 PDK2Q15119 407 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 RPS6KA1Q15418 735 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 MS4A13Q5J8X5 152 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 KCNT1Q5JUK3 1230 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 FAM72AQ5TYM5 149 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 FAM72DQ6L9T8 149 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 SCYL2Q6P3W7 929 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 GET4Q7L5D6 327 aaPredicted RBP13.76□□□□□ -0.21
CNN3-203ENST00000415017 ANKS1BQ7Z6G8 1248 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 FAM72BQ86X60 149 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 CPXM2Q8N436 756 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 ATP6V0D2Q8N8Y2 350 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 RAPGEF5Q92565 580 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 C16orf45Q96MC5 204 aaPredicted RBP13.76□□□□□ -0.21
CNN3-203ENST00000415017 KCTD15Q96SI1 283 aaPredicted RBP13.76□□□□□ -0.21
CNN3-203ENST00000415017 NACA2Q9H009 215 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 SMG9Q9H0W8 520 aaKnown RBP13.76□□□□□ -0.21
CNN3-203ENST00000415017 PCDH18Q9HCL0 1135 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 SMPD4Q9NXE4 827 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 EFR3BQ9Y2G0 817 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 ZNF510Q9Y2H8 683 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 HS3ST4Q9Y661 456 aa13.76□□□□□ -0.21
CNN3-203ENST00000415017 COL4A3Q01955 1670 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 MYO10Q9HD67 2058 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 NUP205Q92621 2012 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 SYNJ2BP-COX16A0A087WUM0 186 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 ENC1O14682 589 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 APOEP02649 317 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 PYGMP11217 842 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 CORO1AP31146 461 aaKnown RBP13.75□□□□□ -0.21
CNN3-203ENST00000415017 CDKN2BP42772 138 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 HARS2P49590 506 aaKnown RBP13.75□□□□□ -0.21
CNN3-203ENST00000415017 FCHO2Q0JRZ9 810 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 DPYSL3Q14195 570 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 CLUL1Q15846 466 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 PUS10Q3MIT2 529 aaKnown RBP13.75□□□□□ -0.21
CNN3-203ENST00000415017 ADGRF1Q5T601 910 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 SYT10Q6XYQ8 523 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 OTOP3Q7RTS5 596 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 RCOR2Q8IZ40 523 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 PYROXD2Q8N2H3 581 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 RASGEF1CQ8N431 466 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 UBL4BQ8N7F7 174 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 E2F7Q96AV8 911 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 OTUB2Q96DC9 234 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 NAPGQ99747 312 aaPredicted RBP13.75□□□□□ -0.21
CNN3-203ENST00000415017 RETREG1Q9H6L5 497 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 ZWILCHQ9H900 591 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 COX16Q9P0S2 106 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 CFAP97Q9P2B7 532 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 PPARGC1AQ9UBK2 798 aaKnown RBP13.75□□□□□ -0.21
CNN3-203ENST00000415017 ZNF212Q9UDV6 495 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 OR12D3Q9UGF7 316 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 TTC7AQ9ULT0 858 aaPredicted RBP13.75□□□□□ -0.21
CNN3-203ENST00000415017 SNX12Q9UMY4 172 aa13.75□□□□□ -0.21
CNN3-203ENST00000415017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
CNN3-203ENST00000415017 ECI2O75521 394 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 ZRANB2O95218 330 aaKnown RBP eCLIP13.74□□□□□ -0.21
CNN3-203ENST00000415017 HMBSP08397 361 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 CD48P09326 243 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 SLC6A4P31645 630 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 VIPR2P41587 438 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 SLC11A2P49281 568 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 DPYSQ14117 519 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 PPP2R5EQ16537 467 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 SMTNL2Q2TAL5 461 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 EFHC2Q5JST6 749 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 TANGO2Q6ICL3 276 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 EP400NLQ6ZTU2 488 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 C14orf80Q86SX3 495 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 DENND1CQ8IV53 801 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 MAFAQ8NHW3 353 aaPredicted RBP13.74□□□□□ -0.21
CNN3-203ENST00000415017 ELSPBP1Q96BH3 223 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 P2RY11Q96G91 374 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 OSBPL9Q96SU4 736 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 ZNF670Q9BS34 389 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 SLITRK6Q9H5Y7 841 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 PRDM16Q9HAZ2 1276 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.74□□□□□ -0.21
CNN3-203ENST00000415017 GPATCH2LQ9NWQ4 482 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 CWC15Q9P013 229 aaKnown RBP13.74□□□□□ -0.21
CNN3-203ENST00000415017 SLC12A6Q9UHW9 1150 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 DNAI1Q9UI46 699 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 KIAA1549LQ6ZVL6 1849 aa13.74□□□□□ -0.21
CNN3-203ENST00000415017 hCG_1818297A0A087WSY0 165 aa13.73□□□□□ -0.21
CNN3-203ENST00000415017 CTAGE9A4FU28 777 aa13.73□□□□□ -0.21
CNN3-203ENST00000415017 WASH4PA8MWX3 477 aa13.73□□□□□ -0.21
CNN3-203ENST00000415017 LRIG2O94898 1065 aa13.73□□□□□ -0.21
CNN3-203ENST00000415017 TNNT1P13805 278 aa13.73□□□□□ -0.21
CNN3-203ENST00000415017 TACR2P21452 398 aa13.73□□□□□ -0.21
CNN3-203ENST00000415017 KLF1Q13351 362 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms