RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 TMCO5BA8MYB1 307 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 CHURC1-FNTBB4DL54 471 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 NPC1O15118 1278 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 PI15O43692 258 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 RRM1P23921 792 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 ZNF143P52747 638 aaPredicted RBP15.17■□□□□ 0.02
LIMS1-206ENST00000414829 AIF1P55008 147 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 MRPS21P82921 87 aaKnown RBP15.17■□□□□ 0.02
LIMS1-206ENST00000414829 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
LIMS1-206ENST00000414829 CDH18Q13634 790 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 SLC18A3Q16572 532 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 FAM133BQ5BKY9 247 aaKnown RBP15.17■□□□□ 0.02
LIMS1-206ENST00000414829 PLEKHA7Q6IQ23 1121 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 ALKBH5Q6P6C2 394 aaKnown RBP15.17■□□□□ 0.02
LIMS1-206ENST00000414829 ANKS1BQ7Z6G8 1248 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 GAS2L3Q86XJ1 694 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 WFIKKN2Q8TEU8 576 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 FNIP1Q8TF40 1166 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 UCMAQ8WVF2 138 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 RXFP2Q8WXD0 754 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 CCDC42Q96M95 316 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 CFAP57Q96MR6 1250 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 PPP1R9BQ96SB3 815 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 TBCBQ99426 244 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 CNPY3Q9BT09 278 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 PIGVQ9NUD9 493 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 ARHGEF38Q9NXL2 777 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 COX16Q9P0S2 106 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 FBXO4Q9UKT5 387 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 TICRRQ7Z2Z1 1910 aa15.17■□□□□ 0.02
LIMS1-206ENST00000414829 A0A0A0MRY4 1105 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 GFRA2O00451 464 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 TIMM44O43615 452 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 AKR1B10O60218 316 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 PAPSS2O95340 614 aaPredicted RBP15.16■□□□□ 0.02
LIMS1-206ENST00000414829 EGFP01133 1207 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 HOXD9P28356 352 aaPredicted RBP15.16■□□□□ 0.02
LIMS1-206ENST00000414829 CDC25BP30305 580 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 PITX1P78337 314 aaPredicted RBP15.16■□□□□ 0.02
LIMS1-206ENST00000414829 KDSRQ06136 332 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 TBX2Q13207 712 aaPredicted RBP15.16■□□□□ 0.02
LIMS1-206ENST00000414829 MAMLD1Q13495 774 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 MS4A13Q5J8X5 152 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 PIK3R6Q5UE93 754 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 LRRC31Q6UY01 552 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 BNIPLQ7Z465 357 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 C12orf40Q86WS4 652 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 EMC1Q8N766 993 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 OLIG1Q8TAK6 271 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 BHMTQ93088 406 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 HAPLN3Q96S86 360 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 FAM126AQ9BYI3 521 aaPredicted RBP15.16■□□□□ 0.02
LIMS1-206ENST00000414829 TKTL2Q9H0I9 626 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 LUC7LQ9NQ29 371 aaKnown RBP15.16■□□□□ 0.02
LIMS1-206ENST00000414829 TAS2R14Q9NYV8 317 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 ARHGAP20Q9P2F6 1191 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 CNOT8Q9UFF9 292 aaKnown RBP15.16■□□□□ 0.02
LIMS1-206ENST00000414829 FBXO10Q9UK96 956 aa15.16■□□□□ 0.02
LIMS1-206ENST00000414829 TRIOO75962 3097 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 A0A1B0GVM2 712 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 TCRBV5S1A1TA0A578 114 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 TCAF2A6NFQ2 919 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 RNF40O75150 1001 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 ENDOD1O94919 500 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 TACR2P21452 398 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 RFC1P35251 1148 aaPredicted RBP15.15■□□□□ 0.02
LIMS1-206ENST00000414829 CXCL12P48061 93 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 NRLP54845 237 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 ATP11AP98196 1134 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 MTAPQ13126 283 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 FZD5Q13467 585 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 ZNF528Q3MIS6 628 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 CCDC14Q49A88 953 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 C10orf76Q5T2E6 689 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 OTUD1Q5VV17 481 aaPredicted RBP15.15■□□□□ 0.02
LIMS1-206ENST00000414829 RNF43Q68DV7 783 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 ZC3H14Q6PJT7 736 aaKnown RBP15.15■□□□□ 0.02
LIMS1-206ENST00000414829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.15■□□□□ 0.02
LIMS1-206ENST00000414829 MFN1Q8IWA4 741 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 LGI2Q8N0V4 545 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 AHI1Q8N157 1196 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 NAT16Q8N8M0 369 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 CTNNBL1Q8WYA6 563 aaPredicted RBP15.15■□□□□ 0.02
LIMS1-206ENST00000414829 C1orf74Q96LT6 269 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 RETREG1Q9H6L5 497 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 PRMT8Q9NR22 394 aaPredicted RBP15.15■□□□□ 0.02
LIMS1-206ENST00000414829 IMPACTQ9P2X3 320 aa15.15■□□□□ 0.02
LIMS1-206ENST00000414829 COL4A3Q01955 1670 aa15.14■□□□□ 0.01
LIMS1-206ENST00000414829 A0A087X0T9 212 aa15.14■□□□□ 0.01
LIMS1-206ENST00000414829 EIF3CLB5ME19 914 aaKnown RBP15.14■□□□□ 0.01
LIMS1-206ENST00000414829 TBL1XO60907 577 aa15.14■□□□□ 0.01
LIMS1-206ENST00000414829 PAGE1O75459 146 aa15.14■□□□□ 0.01
LIMS1-206ENST00000414829 IPO7O95373 1038 aaKnown RBP15.14■□□□□ 0.01
LIMS1-206ENST00000414829 MOCS3O95396 460 aa15.14■□□□□ 0.01
LIMS1-206ENST00000414829 FAM228BP0C875 321 aa15.14■□□□□ 0.01
LIMS1-206ENST00000414829 EIF4A3P38919 411 aaKnown RBP15.14■□□□□ 0.01
LIMS1-206ENST00000414829 SLC12A1Q13621 1099 aa15.14■□□□□ 0.01
LIMS1-206ENST00000414829 DMC1Q14565 340 aa15.14■□□□□ 0.01
LIMS1-206ENST00000414829 ACAP1Q15027 740 aa15.14■□□□□ 0.01
LIMS1-206ENST00000414829 CDO1Q16878 200 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms