RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CBARPQ8N350 705 aaPredicted RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 CSGALNACT2Q8N6G5 542 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 TTC8Q8TAM2 541 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 SCARF2Q96GP6 870 aaPredicted RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 ANKRD36BP1Q96IX9 119 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 SENP8Q96LD8 212 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 MFSD14AQ96MC6 490 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 CGRRF1Q99675 332 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 KCNJ15Q99712 375 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 SSBP4Q9BWG4 385 aaPredicted RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 CDADC1Q9BWV3 514 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 ADAM7Q9H2U9 754 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 SFXN1Q9H9B4 322 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 EMC7Q9NPA0 242 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS41-205ENST00000414632 INTS13Q9NVM9 706 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 HCFC1R1Q9NWW0 138 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 FNIP2Q9P278 1114 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 PPARGC1AQ9UBK2 798 aaKnown RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 STK39Q9UEW8 545 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 SIX4Q9UIU6 781 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 FBXL5Q9UKA1 691 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 FBXW11Q9UKB1 542 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 CTNND2Q9UQB3 1225 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 DERAQ9Y315 318 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 C2CD2Q9Y426 696 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 COL4A3Q01955 1670 aa5.21□□□□□ -1.57
VPS41-205ENST00000414632 NCOR1O75376 2440 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 FSD2A1L4K1 749 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 LRRIQ3A6PVS8 624 aaPredicted RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 KPNA7A9QM74 516 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 C2CD4DB7Z1M9 353 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 H7C4K7 107 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 K7ESF4 209 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 M0QZQ0 153 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 PDXKO00764 312 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 PRRG1O14668 218 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 SYN3O14994 580 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 KIAA0391O15091 583 aaKnown RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 SOAT2O75908 522 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 AKAP3O75969 853 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 VNN2O95498 520 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 HOXB8P17481 243 aaPredicted RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 BCL6P41182 706 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 RAP1GAPP47736 663 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 AARSP49588 968 aaKnown RBP eCLIP5.21□□□□□ -1.58
VPS41-205ENST00000414632 STX17P56962 302 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 UBE2HP62256 183 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 CREMQ03060 361 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 ADCY1Q08828 1119 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 FAPQ12884 760 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 LSAMPQ13449 338 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 BIRC3Q13489 604 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 PSMD6Q15008 389 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 ARHGAP44Q17R89 818 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 GAB4Q2WGN9 574 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 PPM1LQ5SGD2 360 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 ZNF658Q5TYW1 1059 aaPredicted RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 WSCD1Q658N2 575 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 PDXDC1Q6P996 788 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 LILRA6Q6PI73 481 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 SCARA5Q6ZMJ2 495 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 RNF111Q6ZNA4 994 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 GET4Q7L5D6 327 aaPredicted RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 TRAPPC11Q7Z392 1133 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 GRASPQ7Z6J2 395 aaPredicted RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 GPR149Q86SP6 731 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 WDR49Q8IV35 697 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 ADHFE1Q8IWW8 467 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 FAM186BQ8IYM0 893 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 GUF1Q8N442 669 aaKnown RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 CISD2Q8N5K1 135 aaKnown RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 TTC9BQ8N6N2 239 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 FAM181AQ8N9Y4 354 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 STKLD1Q8NE28 680 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 APPL2Q8NEU8 664 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 OR10T2Q8NGX3 314 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 CXorf38Q8TB03 319 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 GOLGA5Q8TBA6 731 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 CACTINQ8WUQ7 758 aaKnown RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 JPH3Q8WXH2 748 aaPredicted RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 SUSD6Q92537 303 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 SMG7Q92540 1137 aaKnown RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 UBE2FQ969M7 185 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 ZNF707Q96C28 371 aaPredicted RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 BORCS6Q96GS4 357 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 CCDC34Q96HJ3 373 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 AHCYL2Q96HN2 611 aaKnown RBP5.21□□□□□ -1.58
VPS41-205ENST00000414632 HPDLQ96IR7 371 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 HSPA12BQ96MM6 686 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 ZNF560Q96MR9 790 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 TIGD1Q96MW7 591 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 FNBP1Q96RU3 617 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 RTP3Q9BQQ7 232 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 CDIP1Q9H305 208 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 SMOC2Q9H3U7 446 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 CYP4F11Q9HBI6 524 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 KIAA1586Q9HCI6 787 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 RMND1Q9NWS8 449 aa5.21□□□□□ -1.58
VPS41-205ENST00000414632 OXSMQ9NWU1 459 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms