RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CLIC5Q9NZA1 410 aa10.34□□□□□ -0.75
DDB1-202ENST00000414411 RSPH14Q9UHP6 348 aa10.34□□□□□ -0.75
DDB1-202ENST00000414411 ATP8A1Q9Y2Q0 1164 aa10.34□□□□□ -0.75
DDB1-202ENST00000414411 SNX24Q9Y343 169 aa10.34□□□□□ -0.75
DDB1-202ENST00000414411 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
DDB1-202ENST00000414411 C2CD4BA6NLJ0 364 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 MOSPD3O75425 235 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 GRAP2O75791 330 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 RHOP08100 348 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 RARAP10276 462 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 COILP38432 576 aaPredicted RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 CCR2P41597 374 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 SLC1A1P43005 524 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 RPL21P46778 160 aaKnown RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 PLTPP55058 493 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 EIF3BP55884 814 aaKnown RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 PABPC1LQ4VXU2 614 aaKnown RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 PRSS36Q5K4E3 855 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 AGBL2Q5U5Z8 902 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 DNAJC24Q6P3W2 148 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 ARHGAP18Q8N392 663 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 LEMD2Q8NC56 503 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 SMG7Q92540 1137 aaKnown RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 ADAM7Q9H2U9 754 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 EPB41L4BQ9H329 900 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 CENPHQ9H3R5 247 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 LRRC19Q9H756 370 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 POPDC2Q9HBU9 364 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 ASAH2Q9NR71 780 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 TLR8Q9NR97 1041 aaKnown RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 METTL5Q9NRN9 209 aaKnown RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 ABCC13Q9NSE7 274 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
DDB1-202ENST00000414411 CLDND1Q9NY35 253 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 SCINQ9Y6U3 715 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 NUDT17P0C025 328 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 GABRR2P28476 465 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 LSP1P33241 339 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 MATKP42679 507 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 GUCY1A3Q02108 690 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 OGDHQ02218 1023 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 SLC5A9Q2M3M2 681 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 RARS2Q5T160 578 aaKnown RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 SYPL2Q5VXT5 272 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 GRASPQ7Z6J2 395 aaPredicted RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 CCDC105Q8IYK2 499 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 DEFB106AQ8N104 65 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 ARFGAP2Q8N6H7 521 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 EMC1Q8N766 993 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 FNIP1Q8TF40 1166 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 SLCO2A1Q92959 643 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 FAM149B1Q96BN6 582 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 MRRFQ96E11 262 aaKnown RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 DDX23Q9BUQ8 820 aaKnown RBP10.33□□□□□ -0.76
DDB1-202ENST00000414411 ADAM33Q9BZ11 813 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 TRPM5Q9NZQ8 1165 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 LCMT1Q9UIC8 334 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 NAALADL1Q9UQQ1 740 aa10.33□□□□□ -0.76
DDB1-202ENST00000414411 DAB1O75553 588 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 FGF19O95750 216 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 FOSL2P15408 326 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 CDC25CP30307 473 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 HPDP32754 393 aaPredicted RBP10.32□□□□□ -0.76
DDB1-202ENST00000414411 NOS2P35228 1153 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 MDH1P40925 334 aaKnown RBP10.32□□□□□ -0.76
DDB1-202ENST00000414411 CCT5P48643 541 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 TUBP50607 506 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 PMS2P54278 862 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 NTHL1P78549 312 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 ZNF252P-AS1Q0IIN9 211 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 EIF4EBP2Q13542 120 aaPredicted RBP10.32□□□□□ -0.76
DDB1-202ENST00000414411 KRT71Q3SY84 523 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 BTBD8Q5XKL5 378 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 DCUN1D2Q6PH85 259 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 BNIPLQ7Z465 357 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 MICALL1Q8N3F8 863 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 SHKBP1Q8TBC3 707 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 EDEM1Q92611 657 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 TCEAL4Q96EI5 215 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 MCEEQ96PE7 176 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 NPY6RQ99463 290 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 TRIM62Q9BVG3 475 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 FAM129AQ9BZQ8 928 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 PABPC3Q9H361 631 aaKnown RBP10.32□□□□□ -0.76
DDB1-202ENST00000414411 SLC12A6Q9UHW9 1150 aa10.32□□□□□ -0.76
DDB1-202ENST00000414411 DOCK8Q8NF50 2099 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 A0A1W2PRU2 124 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 MYO1CO00159 1063 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 PROSCO94903 275 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 ECEL1O95672 775 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 OLFM2O95897 454 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 TBX18O95935 607 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 OAS1P00973 400 aaKnown RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 MYL4P12829 197 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 NCAM1P13591 858 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 RARGP13631 454 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 PDGFRAP16234 1089 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 PTPN9P43378 593 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms