RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 LRRD1A4D1F6 860 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 C3orf70A6NLC5 250 aaPredicted RBP17.78■□□□□ 0.44
PTPRC-206ENST00000413409 C2CD4BA6NLJ0 364 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 KPNA7A9QM74 516 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 E5RJQ4 531 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 NDC80O14777 642 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 LIASO43766 372 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 ATF2P15336 505 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 WARSP23381 471 aaKnown RBP17.78■□□□□ 0.44
PTPRC-206ENST00000413409 RAB27AP51159 221 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 PMS2P54278 862 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 BCAT1P54687 386 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 NRLP54845 237 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 ZNF844Q08AG5 666 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 SNX1Q13596 522 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 PPP1R26Q5T8A7 1209 aaPredicted RBP17.78■□□□□ 0.44
PTPRC-206ENST00000413409 AGBL2Q5U5Z8 902 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 RHBDF2Q6PJF5 856 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 ZNF852Q6ZMS4 543 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 MAMSTRQ6ZN01 415 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 ZNF771Q7L3S4 317 aaPredicted RBP17.78■□□□□ 0.44
PTPRC-206ENST00000413409 ANKS1BQ7Z6G8 1248 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 TMEM110Q86TL2 294 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 ACOT1Q86TX2 421 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 TTC30AQ86WT1 665 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 CCDC89Q8N998 374 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 OR6B3Q8NGW1 331 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 ARL8AQ96BM9 186 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 PGBD4Q96DM1 585 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 CCDC114Q96M63 670 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 FAM193BQ96PV7 902 aaPredicted RBP17.78■□□□□ 0.44
PTPRC-206ENST00000413409 PPP1R10Q96QC0 940 aaKnown RBP17.78■□□□□ 0.44
PTPRC-206ENST00000413409 PLA2G2FQ9BZM2 168 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 CHRDQ9H2X0 955 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 PABPC3Q9H361 631 aaKnown RBP17.78■□□□□ 0.44
PTPRC-206ENST00000413409 RSAD1Q9HA92 442 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 RXFP3Q9NSD7 469 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 KLHL11Q9NVR0 708 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 NME7Q9Y5B8 376 aa17.78■□□□□ 0.44
PTPRC-206ENST00000413409 A8MXQ7 604 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 PTGESO14684 152 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 RNF8O76064 485 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 KRT14P02533 472 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 MYZAPP0CAP1 466 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 OR1G1P47890 313 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 RPL34P49207 117 aaKnown RBP17.77■□□□□ 0.44
PTPRC-206ENST00000413409 SKOR1P84550 965 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 SOX4Q06945 474 aaPredicted RBP17.77■□□□□ 0.44
PTPRC-206ENST00000413409 BST2Q10589 180 aaKnown RBP17.77■□□□□ 0.44
PTPRC-206ENST00000413409 SIM2Q14190 667 aaPredicted RBP17.77■□□□□ 0.44
PTPRC-206ENST00000413409 ATP13A4Q4VNC1 1196 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 CEP85LQ5SZL2 805 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 ZFYVE27Q5T4F4 411 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 EMC10Q5UCC4 262 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 IL31Q6EBC2 164 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 TXNRD3NBQ6F5E7 133 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 OR6B2Q6IFH4 312 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 POTEHQ6S545 545 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 OLFML1Q6UWY5 402 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 UNQ6494/PRO21346Q6UXR6 183 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 BBS12Q6ZW61 710 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 CROCCP2Q86T23 111 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 ARFGAP1Q8N6T3 406 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 KDF1Q8NAX2 398 aaPredicted RBP17.77■□□□□ 0.44
PTPRC-206ENST00000413409 TTC13Q8NBP0 860 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 APPL2Q8NEU8 664 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 SLC35F5Q8WV83 523 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 RAPGEF5Q92565 580 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 ATP6V1G3Q96LB4 118 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 FOXP3Q9BZS1 431 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 SNX25Q9H3E2 840 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 KLK14Q9P0G3 267 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 KANSL3Q9P2N6 904 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 DRG1Q9Y295 367 aaKnown RBP17.77■□□□□ 0.44
PTPRC-206ENST00000413409 ATP8A1Q9Y2Q0 1164 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 DMXL2Q8TDJ6 3036 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 SDK1Q7Z5N4 2213 aa17.77■□□□□ 0.44
PTPRC-206ENST00000413409 LAMA1P25391 3075 aa17.77■□□□□ 0.43
PTPRC-206ENST00000413409 A6NNZ2 444 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 SOBPA7XYQ1 873 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 SHOX2O60902 331 aaPredicted RBP17.76■□□□□ 0.43
PTPRC-206ENST00000413409 RARGP13631 454 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 DESP17661 470 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 IVDP26440 423 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 LMAN1P49257 510 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 LLGL1Q15334 1064 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 TUBB8Q3ZCM7 444 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 CEP128Q6ZU80 1094 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 ARCQ7LC44 396 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 HOOK3Q86VS8 718 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 ADGRF2Q8IZF7 708 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 EMC1Q8N766 993 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 C12orf29Q8N999 325 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 ANKRD52Q8NB46 1076 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 TNIP3Q96KP6 325 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 GPR62Q9BZJ7 368 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 EPB41L4BQ9H329 900 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 NOTCH4Q99466 2003 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 ITPR1Q14643 2758 aa17.76■□□□□ 0.43
PTPRC-206ENST00000413409 HUS1O60921 280 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms