RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FOLH1Q04609 750 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 FAM182AQ5T1J6 154 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 FRMD7Q6ZUT3 714 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 RSPH3Q86UC2 560 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 HPS6Q86YV9 775 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 CXorf38Q8TB03 319 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 CCDC124Q96CT7 223 aaKnown RBP18.13■□□□□ 0.49
SDCBP-202ENST00000413219 DGCR14Q96DF8 476 aaKnown RBP18.13■□□□□ 0.49
SDCBP-202ENST00000413219 NAT9Q9BTE0 207 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 UBE2OQ9C0C9 1292 aaKnown RBP18.13■□□□□ 0.49
SDCBP-202ENST00000413219 CDT1Q9H211 546 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 Q9H521 79 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 CYP4F11Q9HBI6 524 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 BTBD7Q9P203 1132 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 TNFSF13BQ9Y275 285 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 DTNAQ9Y4J8 743 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 CDY2AQ9Y6F7 541 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 CDY1Q9Y6F8 540 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 LCTP09848 1927 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 C15orf38-AP3S2A0A0A6YYH1 394 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 WDR27A2RRH5 827 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 ITGB3P05106 788 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 CYP3A5P20815 502 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 SNAPC2Q13487 334 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 R3HDM1Q15032 1099 aaKnown RBP18.13■□□□□ 0.49
SDCBP-202ENST00000413219 CCDC153Q494R4 210 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 EEF1DP3Q658K8 133 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 ARPINQ7Z6K5 226 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 HACE1Q8IYU2 909 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 TTLL6Q8N841 843 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 SEPT1Q8WYJ6 367 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 ZCWPW1Q9H0M4 648 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 EIF2B3Q9NR50 452 aaKnown RBP18.13■□□□□ 0.49
SDCBP-202ENST00000413219 PLK2Q9NYY3 685 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 PTTG2Q9NZH5 202 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 PRPF19Q9UMS4 504 aaKnown RBP18.13■□□□□ 0.49
SDCBP-202ENST00000413219 PCDHB12Q9Y5F1 795 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 LOC285556D6RIA3 1793 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 DOCK1Q14185 1865 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 SORBS2O94875 1100 aaKnown RBP18.12■□□□□ 0.49
SDCBP-202ENST00000413219 MAP3K6O95382 1288 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 ITGA2BP08514 1039 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 SMIM18P0DKX4 95 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 PGAM1P18669 254 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 NCF2P19878 526 aaPredicted RBP18.12■□□□□ 0.49
SDCBP-202ENST00000413219 ADORA2AP29274 412 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 GRIA1P42261 906 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 ALDH1A3P47895 512 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 NUMBP49757 651 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 PRKG1Q13976 671 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 DPYSL2Q16555 572 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 GRAMD1BQ3KR37 738 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 LRRC8BQ6P9F7 803 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 OLFML1Q6UWY5 402 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 NIM1KQ8IY84 436 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 PQLC1Q8N2U9 271 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 GTF2IRD1Q9UHL9 959 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 TSPAN16Q9UKR8 245 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 KAT6AQ92794 2004 aa18.12■□□□□ 0.49
SDCBP-202ENST00000413219 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 GRAP2O75791 330 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 PFKMP08237 780 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 TCF7P36402 384 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 RPL5P46777 297 aaKnown RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 GBE1Q04446 702 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 KLF10Q13118 480 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 MAP1SQ66K74 1059 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 HEATR6Q6AI08 1181 aaKnown RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 FBXL19Q6PCT2 694 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 KCNT2Q6UVM3 1135 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 EPGNQ6UW88 154 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 ATG14Q6ZNE5 492 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 TMC7Q7Z402 723 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 SATL1Q86VE3 508 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 CATSPER1Q8NEC5 780 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 ISL2Q96A47 359 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 PRICKLE1Q96MT3 831 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 STK39Q9UEW8 545 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 RAB26Q9ULW5 256 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 SCAF8Q9UPN6 1271 aaKnown RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 PHF24Q9UPV7 400 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 INPP5FQ9Y2H2 1132 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 LACTBL1A8MY62 500 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 HACD1B0YJ81 288 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 TXNDC9O14530 226 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 SETSIPP0DME0 302 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 ETS2P15036 469 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 ARRB2P32121 409 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 GARSP41250 739 aaKnown RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 SLC6A3Q01959 620 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 SLC10A2Q12908 348 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 TMEM132AQ24JP5 1023 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 PPP6R3Q5H9R7 873 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 TCHHL1Q5QJ38 904 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-202ENST00000413219 CATSPERGQ6ZRH7 1159 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 UNC5BQ8IZJ1 945 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 PHTF2Q8N3S3 785 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 CHST13Q8NET6 341 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 HIC2Q96JB3 615 aa18.11■□□□□ 0.49
SDCBP-202ENST00000413219 CDH19Q9H159 772 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms