RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ACTN3Q08043 901 aaPredicted RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 DNAJC3Q13217 504 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 ITGA7Q13683 1181 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 DPYSQ14117 519 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 LPIN1Q14693 890 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 LRRC26Q2I0M4 334 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 TIGD5Q53EQ6 642 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 HHATQ5VTY9 493 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 RFX8Q6ZV50 586 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 GSDMBQ8TAX9 411 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 MGARPQ8TDB4 240 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 RSPH1Q8WYR4 309 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 SUSD3Q96L08 255 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 EPAS1Q99814 870 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 EBNA1BP2Q99848 306 aaKnown RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 ELAC2Q9BQ52 826 aaKnown RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 MIOSQ9NXC5 875 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 IGSF9Q9P2J2 1179 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 MYBPHLA2RUH7 354 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 HHLA1C9JL84 531 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 KRT38O76015 456 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 BEST1O76090 585 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 B3GAT3O94766 335 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 APOEP02649 317 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 ALADP13716 330 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 CREB1P16220 341 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 KRT4P19013 534 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 DNAJB2P25686 324 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 CXCR3P49682 368 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 SLC10A2Q12908 348 aaPredicted RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 SEMA3BQ13214 749 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 MPP2Q14168 576 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 TRIM71Q2Q1W2 868 aaKnown RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 ANKRD20A2Q5SQ80 823 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 ANKRD20A1Q5TYW2 823 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 ANKRD20A3Q5VUR7 823 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 OTUD1Q5VV17 481 aaPredicted RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 KIAA0319Q5VV43 1072 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 RNF43Q68DV7 783 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 LRRC8BQ6P9F7 803 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 SPATA21Q7Z572 469 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 ZNF598Q86UK7 904 aaKnown RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 CAND1Q86VP6 1230 aaKnown RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 ECHDC2Q86YB7 292 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 SLC7A14Q8TBB6 771 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 CCDC110Q8TBZ0 833 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 ZNF398Q8TD17 642 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 LRRC8CQ8TDW0 803 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 MZB1Q8WU39 189 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 PPP1R2P1Q96PQ5 205 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 ADAM2Q99965 735 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 LBHD1Q9BQE6 289 aaPredicted RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 FTHL17Q9BXU8 183 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 PITPNM3Q9BZ71 974 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 OSBPL2Q9H1P3 480 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 RGS18Q9NS28 235 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 RNF19AQ9NV58 838 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 HAUS2Q9NVX0 235 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 MKS1Q9NXB0 559 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 KLHL14Q9P2G3 628 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 TRHDEQ9UKU6 1024 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 PCDHB8Q9UN66 801 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 ATP11BQ9Y2G3 1177 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 FRMPD3Q5JV73 1810 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 CEP290O15078 2479 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 DCLK1O15075 740 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 PSMD3O43242 534 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 SLC34A2O95436 690 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 SNRPAP09012 282 aaKnown RBP13.99□□□□□ -0.17
LIMS1-205ENST00000410093 NCAM1P13591 858 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 TAC1P20366 129 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 COG7P83436 770 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 SLC18A2Q05940 514 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 CCDC15Q0P6D6 951 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 FRG1Q14331 258 aaKnown RBP13.99□□□□□ -0.17
LIMS1-205ENST00000410093 LRRC14Q15048 493 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 SPDYAQ5MJ70 313 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 BRMS1LQ5PSV4 323 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 HP1BP3Q5SSJ5 553 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-205ENST00000410093 OVOS1Q6IE37 1185 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 GLB1LQ6UWU2 654 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 SLC39A5Q6ZMH5 540 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 TRPM8Q7Z2W7 1104 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 TRIM42Q8IWZ5 723 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 BANPQ8N9N5 519 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 ZMIZ2Q8NF64 920 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 URGCPQ8TCY9 931 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 LPPQ93052 612 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 MYLPFQ96A32 169 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 TTC17Q96AE7 1141 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 GLT1D1Q96MS3 346 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 WDR83Q9BRX9 315 aaKnown RBP13.99□□□□□ -0.17
LIMS1-205ENST00000410093 COLEC11Q9BWP8 271 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 ADAM33Q9BZ11 813 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 WDR6Q9NNW5 1121 aaKnown RBP13.99□□□□□ -0.17
LIMS1-205ENST00000410093 PCDHA11Q9Y5I1 949 aa13.99□□□□□ -0.17
LIMS1-205ENST00000410093 CASTOR2A6NHX0 329 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 SDR42E2A6NKP2 422 aa13.98□□□□□ -0.17
LIMS1-205ENST00000410093 YJEFN3A6XGL0 299 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms