RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 MARCOQ9UEW3 520 aaPredicted RBP16.36■□□□□ 0.21
HOXD3-202ENST00000410016 XPO1O14980 1071 aaKnown RBP16.35■□□□□ 0.21
HOXD3-202ENST00000410016 STX3Q13277 289 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 CMPK2Q5EBM0 449 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 PACS1Q6VY07 963 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 OR6J1Q8NGC5 347 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 ACMSDQ8TDX5 336 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 TMEM40Q8WWA1 233 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 MCUR1Q96AQ8 359 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 WWP1Q9H0M0 922 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 SNX25Q9H3E2 840 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 RNF181Q9P0P0 153 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 RALGAPA2Q2PPJ7 1873 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 B2RBV5 119 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 RNF103O00237 685 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 PDHXO00330 501 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 OPHN1O60890 802 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 GLUD2P49448 558 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 WASHC5Q12768 1159 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 BLMHQ13867 455 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 PDE1CQ14123 709 aaPredicted RBP16.35■□□□□ 0.21
HOXD3-202ENST00000410016 PCBP1Q15365 356 aaKnown RBP eCLIP16.35■□□□□ 0.21
HOXD3-202ENST00000410016 CASC4Q6P4E1 433 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 SMC1BQ8NDV3 1235 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 APPL2Q8NEU8 664 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 MAML3Q96JK9 1138 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 CCDC106Q9BWC9 280 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 TRIM6Q9C030 488 aaPredicted RBP16.35■□□□□ 0.21
HOXD3-202ENST00000410016 PRDM16Q9HAZ2 1276 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 GOLGA2P5Q9HBQ8 144 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 PPARGC1AQ9UBK2 798 aaKnown RBP16.35■□□□□ 0.21
HOXD3-202ENST00000410016 PSAT1Q9Y617 370 aa16.35■□□□□ 0.21
HOXD3-202ENST00000410016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.34■□□□□ 0.21
HOXD3-202ENST00000410016 MBLAC1A4D2B0 266 aaPredicted RBP16.34■□□□□ 0.21
HOXD3-202ENST00000410016 BEST1O76090 585 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 KCNE1P15382 129 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 MGAT1P26572 445 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 CPA2P48052 419 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 SULT1E1P49888 294 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 RAP1GDS1P52306 607 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 SESN2P58004 480 aaPredicted RBP16.34■□□□□ 0.21
HOXD3-202ENST00000410016 ADIGQ0VDE8 80 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 HIC1Q14526 733 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 FASTKD1Q53R41 847 aaKnown RBP16.34■□□□□ 0.21
HOXD3-202ENST00000410016 DCAF6Q58WW2 860 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 MBLAC2Q68D91 279 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 C16orf46Q6P387 395 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 TMPRSS6Q8IU80 811 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 RNF139Q8WU17 664 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 ZC3H15Q8WU90 426 aaKnown RBP16.34■□□□□ 0.21
HOXD3-202ENST00000410016 NPY6RQ99463 290 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 HNRNPABQ99729 332 aaKnown RBP16.34■□□□□ 0.21
HOXD3-202ENST00000410016 EBF4Q9BQW3 602 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 CEP41Q9BYV8 373 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.34■□□□□ 0.21
HOXD3-202ENST00000410016 KRT36O76013 467 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 PRKCGP05129 697 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 ENO1P06733 434 aaKnown RBP16.34■□□□□ 0.21
HOXD3-202ENST00000410016 ATP6V1C1P21283 382 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 IRX4P78413 519 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 AP1B1Q10567 949 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 DBN1Q16643 649 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 PAQR9Q6ZVX9 377 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 OSTM1Q86WC4 334 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 CCNJLQ8IV13 435 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 TP53INP2Q8IXH6 220 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 B3GALNT2Q8NCR0 500 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 RBM15BQ8NDT2 890 aaKnown RBP16.34■□□□□ 0.21
HOXD3-202ENST00000410016 NRG4Q8WWG1 115 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 FAM149B1Q96BN6 582 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 MS4A4AQ96JQ5 239 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 ZNF778Q96MU6 729 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 DUSP16Q9BY84 665 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 ABHD16BQ9H3Z7 469 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 PRDM12Q9H4Q4 367 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 XPNPEP3Q9NQH7 507 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 STOML1Q9UBI4 398 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 PLA2G4CQ9UP65 541 aa16.34■□□□□ 0.21
HOXD3-202ENST00000410016 NRCAMQ92823 1304 aa16.33■□□□□ 0.21
HOXD3-202ENST00000410016 MYO18AQ92614 2054 aaKnown RBP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 SMIM35A0A1B0GVV1 85 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 TPP1O14773 563 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 LIN7AO14910 233 aaPredicted RBP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 ITM2AO43736 263 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 MAGEC1O60732 1142 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 TBX10O75333 385 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 SMIM10L2AP0DMW4 78 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 SMIM10L2BP0DMW5 78 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 FGF3P11487 239 aaPredicted RBP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 PGAM1P18669 254 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 PSMB4P28070 264 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 PGM1P36871 562 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 PNPLA4P41247 253 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 NDUFV1P49821 464 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 TAF6P49848 677 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 LILRA4P59901 499 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 RCN1Q15293 331 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 UBXN11Q5T124 520 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 TEDDM1Q5T9Z0 273 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 SYPL2Q5VXT5 272 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms