RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 KIAA1841Q6NSI8 718 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 C1orf228Q6PIY5 440 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 GSTA5Q7RTV2 222 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 RELL1Q8IUW5 271 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 HERC6Q8IVU3 1022 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 C7orf61Q8IZ16 206 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 FCRL2Q96LA5 508 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 FOXP3Q9BZS1 431 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 PHACTR1Q9C0D0 580 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 EPB41L4BQ9H329 900 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 ACBD3Q9H3P7 528 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 DTLQ9NZJ0 730 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 MTRF1LQ9UGC7 380 aaKnown RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 FARP1Q9Y4F1 1045 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 NUP205Q92621 2012 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 SGK1O00141 431 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 MFSD11O43934 449 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 ZNF189O75820 626 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 FGF18O76093 207 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 HMGA1P17096 107 aaKnown RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 CCR1P32246 355 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 HSD17B3P37058 310 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 ADCY8P40145 1251 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 MTMR3Q13615 1198 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 PRKD1Q15139 912 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 TRIP13Q15645 432 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 P3H1Q32P28 736 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 SLC45A4Q5BKX6 768 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 IZUMO3Q5VZ72 239 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 PRUNE1Q86TP1 453 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 CDKL3Q8IVW4 592 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 TCEAL8Q8IYN2 117 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 VPS52Q8N1B4 723 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 PDZD8Q8NEN9 1154 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 GPR152Q8TDT2 470 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 RAD9AQ99638 391 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 SH3GL2Q99962 352 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 MRPL17Q9NRX2 175 aaKnown RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 SFMBT1Q9UHJ3 866 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 SHOC2Q9UQ13 582 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 LZTS1Q9Y250 596 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 SSX2IPQ9Y2D8 614 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 YIPF1Q9Y548 306 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 ZBBXA8MT70 800 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 H0YGN5 161 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 SMAPO00193 183 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 C2CD2LO14523 706 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 PPP1R12AO14974 1030 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 MSI1O43347 362 aaKnown RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 ZSCAN5DPP0CG00 497 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 CSH1P0DML2 217 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 CSH2P0DML3 217 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 SLC2A3P11169 496 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 RARGP13631 454 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 RPL22P35268 128 aaKnown RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 TPI1P60174 286 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 RING1Q06587 406 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 MORF4L2Q15014 288 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 TRIP4Q15650 581 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 DARS2Q6PI48 645 aaKnown RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 KLHDC10Q6PID8 442 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 LRIG3Q6UXM1 1119 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 BZW1Q7L1Q6 419 aaKnown RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 PCGF5Q86SE9 256 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 HOOK3Q86VS8 718 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 ZNF683Q8IZ20 524 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 SDR16C5Q8N3Y7 309 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 ZCCHC9Q8N567 271 aaKnown RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 RSAD2Q8WXG1 361 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 C1orf74Q96LT6 269 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 CDK5RAP1Q96SZ6 601 aaKnown RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 EPAS1Q99814 870 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 OR12D3Q9UGF7 316 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 ANAPC5Q9UJX4 755 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 TPX2Q9ULW0 747 aaKnown RBP5.7□□□□□ -1.5
EPHA4-202ENST00000409854 MFHAS1Q9Y4C4 1052 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 HEY1Q9Y5J3 304 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 IRAK3Q9Y616 596 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 NFS1Q9Y697 457 aa5.7□□□□□ -1.5
EPHA4-202ENST00000409854 CREB3O43889 395 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 PAGE1O75459 146 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 LRIG2O94898 1065 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 ERCC2P18074 760 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 MAGEA6P43360 314 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 TUBP50607 506 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 DHX9Q08211 1270 aaKnown RBP5.69□□□□□ -1.5
EPHA4-202ENST00000409854 GPS1Q13098 491 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 SLMAPQ14BN4 828 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 ACBD5Q5T8D3 534 aaPredicted RBP5.69□□□□□ -1.5
EPHA4-202ENST00000409854 C4orf22Q6V702 233 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 ZC3H18Q86VM9 953 aaKnown RBP5.69□□□□□ -1.5
EPHA4-202ENST00000409854 KRT222Q8N1A0 295 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 FAM71DQ8N9W8 422 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 GIPC2Q8TF65 315 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 SNRNP27Q8WVK2 155 aaKnown RBP5.69□□□□□ -1.5
EPHA4-202ENST00000409854 PRCCQ92733 491 aaPredicted RBP5.69□□□□□ -1.5
EPHA4-202ENST00000409854 ZIM3Q96PE6 472 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 KLC2Q9H0B6 622 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 C10orf88Q9H8K7 445 aa5.69□□□□□ -1.5
EPHA4-202ENST00000409854 NUP210Q8TEM1 1887 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms