RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 TTC24A2A3L6 582 aaPredicted RBP11.74□□□□□ -0.53
SNX13-202ENST00000409604 XPO1O14980 1071 aaKnown RBP11.74□□□□□ -0.53
SNX13-202ENST00000409604 AVILO75366 819 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 KRT37O76014 449 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 RTN3O95197 1032 aaPredicted RBP11.74□□□□□ -0.53
SNX13-202ENST00000409604 ARHGEF7Q14155 803 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 GLE1Q53GS7 698 aaKnown RBP11.74□□□□□ -0.53
SNX13-202ENST00000409604 CLEC20AQ6ZU45 233 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 PDLIM7Q9NR12 457 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 IL1RAPL1Q9NZN1 696 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 PAK5Q9P286 719 aa11.74□□□□□ -0.53
SNX13-202ENST00000409604 RFXAPO00287 272 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 CA3P07451 260 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 GPD2P43304 727 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 JAM2P57087 298 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 SETDB1Q15047 1291 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 LRRC73Q5JTD7 316 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 FBXO36Q8NEA4 188 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 LCMT1Q9UIC8 334 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 INSL6Q9Y581 213 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 MCM3APO60318 1980 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 ALDH3A1P30838 453 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 GLRBP48167 497 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 NRIP1P48552 1158 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 CCT5P48643 541 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 RAB6CQ53S08 254 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 RTP2Q5QGT7 225 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 RNF19BQ6ZMZ0 732 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 TAC4Q86UU9 113 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 PHF13Q86YI8 300 aaPredicted RBP11.73□□□□□ -0.53
SNX13-202ENST00000409604 C3orf58Q8NDZ4 430 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 VCPIP1Q96JH7 1222 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 RAB6CQ9H0N0 254 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 CRTAC1Q9NQ79 661 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 PCMTD2Q9NV79 361 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 UTP6Q9NYH9 597 aaKnown RBP11.73□□□□□ -0.53
SNX13-202ENST00000409604 SLC39A10Q9ULF5 831 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 COQ4Q9Y3A0 265 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 SLC30A1Q9Y6M5 507 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 MYH7BA7E2Y1 1941 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 PCDH8O95206 1070 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 PIGRP01833 764 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 TFE3P19532 575 aaPredicted RBP11.73□□□□□ -0.53
SNX13-202ENST00000409604 TGM2P21980 687 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 PBLDP30039 288 aaPredicted RBP11.73□□□□□ -0.53
SNX13-202ENST00000409604 RPS24P62847 133 aaKnown RBP11.73□□□□□ -0.53
SNX13-202ENST00000409604 IRF5Q13568 498 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 PDK2Q15119 407 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 CNKSR3Q6P9H4 555 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 NDUFAF2Q8N183 169 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 MDM1Q8TC05 714 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 SPPL2BQ8TCT7 592 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 EPS8L3Q8TE67 593 aaKnown RBP11.73□□□□□ -0.53
SNX13-202ENST00000409604 EMID1Q96A84 441 aaPredicted RBP11.73□□□□□ -0.53
SNX13-202ENST00000409604 EGFL8Q99944 293 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 DDX23Q9BUQ8 820 aaKnown RBP11.73□□□□□ -0.53
SNX13-202ENST00000409604 XYLT2Q9H1B5 865 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 AVENQ9NQS1 362 aaPredicted RBP11.73□□□□□ -0.53
SNX13-202ENST00000409604 CPQQ9Y646 472 aa11.73□□□□□ -0.53
SNX13-202ENST00000409604 TPRP12270 2363 aaKnown RBP11.72□□□□□ -0.53
SNX13-202ENST00000409604 SCAMP1O15126 338 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 STX7O15400 261 aaKnown RBP11.72□□□□□ -0.53
SNX13-202ENST00000409604 NBNO60934 754 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 MYOGP15173 224 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 RPL21P46778 160 aaKnown RBP11.72□□□□□ -0.53
SNX13-202ENST00000409604 KCNQ1P51787 676 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 GUCY1A3Q02108 690 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 LRRC26Q2I0M4 334 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 THEMIS2Q5TEJ8 643 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 DNAJB7Q7Z6W7 309 aaPredicted RBP11.72□□□□□ -0.53
SNX13-202ENST00000409604 MON1AQ86VX9 555 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 MAML1Q92585 1016 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 SPATA17Q96L03 361 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 ACBD6Q9BR61 282 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 ZCWPW1Q9H0M4 648 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 ZDBF2Q9HCK1 2354 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 CYP1A2P05177 515 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 PECAM1P16284 738 aaPredicted RBP11.72□□□□□ -0.53
SNX13-202ENST00000409604 CHRM3P20309 590 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 CORO1AP31146 461 aaKnown RBP11.72□□□□□ -0.53
SNX13-202ENST00000409604 ANKRD20A8PQ5CZ79 823 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 CCDC149Q6ZUS6 474 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 FAM124AQ86V42 546 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 UNC45BQ8IWX7 931 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 RAB3IL1Q8TBN0 382 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 HTR3CQ8WXA8 447 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 APBB2Q92870 758 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 DCLK3Q9C098 648 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 BPIFA1Q9NP55 256 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 CNGB3Q9NQW8 809 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 BRWD1Q9NSI6 2320 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 KNTC1P50748 2209 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 OR6C75A6NL08 312 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 CCL22O00626 93 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 ZBTB22O15209 634 aa11.72□□□□□ -0.53
SNX13-202ENST00000409604 PSMB4P28070 264 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms