RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 P2RY11Q96G91 374 aa21.36■■□□□ 1.01
USP39-203ENST00000409470 ZNF317Q96PQ6 595 aaPredicted RBP21.36■■□□□ 1.01
USP39-203ENST00000409470 CYTH2Q99418 400 aa21.36■■□□□ 1.01
USP39-203ENST00000409470 EPAS1Q99814 870 aa21.36■■□□□ 1.01
USP39-203ENST00000409470 PRDM12Q9H4Q4 367 aa21.36■■□□□ 1.01
USP39-203ENST00000409470 TRIM17Q9Y577 477 aa21.36■■□□□ 1.01
USP39-203ENST00000409470 PTPRDP23468 1912 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 NLRC5Q86WI3 1866 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 RNF103O00237 685 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 ENPP3O14638 875 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 PIAS1O75925 651 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 OAZ2O95190 189 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 GLUD2P49448 558 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 CDK7P50613 346 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 MPP2Q14168 576 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 BTBD8Q5XKL5 378 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 FAM126BQ8IXS8 530 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 SMC6Q96SB8 1091 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 ZCWPW1Q9H0M4 648 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 SENP1Q9P0U3 644 aa21.35■■□□□ 1.01
USP39-203ENST00000409470 F5H423 210 aaPredicted RBP21.34■■□□□ 1.01
USP39-203ENST00000409470 MYCP01106 439 aaPredicted RBP21.34■■□□□ 1.01
USP39-203ENST00000409470 VIMP08670 466 aaKnown RBP21.34■■□□□ 1.01
USP39-203ENST00000409470 FDFT1P37268 417 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 CBLBQ13191 982 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 SEMA5AQ13591 1074 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 MICALCLQ6ZW33 695 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 SPATS2Q86XZ4 545 aaKnown RBP21.34■■□□□ 1.01
USP39-203ENST00000409470 AGGF1Q8N302 714 aaeCLIP21.34■■□□□ 1.01
USP39-203ENST00000409470 COLGALT1Q8NBJ5 622 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 ABCC13Q9NSE7 274 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 OR12D3Q9UGF7 316 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 ZC3H7BQ9UGR2 993 aaKnown RBP21.34■■□□□ 1.01
USP39-203ENST00000409470 RRP15Q9Y3B9 282 aaKnown RBP21.34■■□□□ 1.01
USP39-203ENST00000409470 SNX10Q9Y5X0 201 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 TCRBV9S1A1TA0A576 114 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 FAM47DPA6NHR8 397 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 DNM1LO00429 736 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 OPHN1O60890 802 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 SPAG7O75391 227 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 SARNPP82979 210 aaKnown RBP21.34■■□□□ 1.01
USP39-203ENST00000409470 ADGRD1Q6QNK2 874 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 BEND5Q7L4P6 421 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 CEP57Q86XR8 500 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 GDAP1Q8TB36 358 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 SEZ6LQ9BYH1 1024 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 CEP41Q9BYV8 373 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 ELAC1Q9H777 363 aaKnown RBP21.34■■□□□ 1.01
USP39-203ENST00000409470 LRFN2Q9ULH4 789 aa21.34■■□□□ 1.01
USP39-203ENST00000409470 TNFRSF10BO14763 440 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 CPP00450 1065 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 STX2P32856 288 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 ZNF135P52742 658 aaPredicted RBP21.33■■□□□ 1.01
USP39-203ENST00000409470 PLEKHG4Q58EX7 1191 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 VARS2Q5ST30 1063 aaKnown RBP21.33■■□□□ 1.01
USP39-203ENST00000409470 GKAP1Q5VSY0 366 aaPredicted RBP21.33■■□□□ 1.01
USP39-203ENST00000409470 SRLQ86TD4 932 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 TP53INP2Q8IXH6 220 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 LRRC34Q8IZ02 419 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 LRRC39Q96DD0 335 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 DHRS4Q9BTZ2 278 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 UNC93B1Q9H1C4 597 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 KIF9Q9HAQ2 790 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 XAB2Q9HCS7 855 aaKnown RBP21.33■■□□□ 1.01
USP39-203ENST00000409470 RAD54BQ9Y620 910 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 IKBKGQ9Y6K9 419 aa21.33■■□□□ 1.01
USP39-203ENST00000409470 SYN3O14994 580 aa21.33■■□□□ 1
USP39-203ENST00000409470 EPHB2P29323 1055 aa21.33■■□□□ 1
USP39-203ENST00000409470 NFE2Q16621 373 aaPredicted RBP21.33■■□□□ 1
USP39-203ENST00000409470 C4orf33Q8N1A6 199 aa21.33■■□□□ 1
USP39-203ENST00000409470 SEPT8Q92599 483 aa21.33■■□□□ 1
USP39-203ENST00000409470 SEC16BQ96JE7 1060 aa21.33■■□□□ 1
USP39-203ENST00000409470 FAM169AQ9Y6X4 670 aa21.33■■□□□ 1
USP39-203ENST00000409470 PATJQ8NI35 1801 aa21.32■■□□□ 1
USP39-203ENST00000409470 GPNMBQ14956 572 aa21.32■■□□□ 1
USP39-203ENST00000409470 KBTBD12Q3ZCT8 623 aa21.32■■□□□ 1
USP39-203ENST00000409470 CTXN3Q4LDR2 81 aa21.32■■□□□ 1
USP39-203ENST00000409470 ZNF534Q76KX8 674 aa21.32■■□□□ 1
USP39-203ENST00000409470 DCAKDQ8WVC6 231 aa21.32■■□□□ 1
USP39-203ENST00000409470 ADAM28Q9UKQ2 775 aa21.32■■□□□ 1
USP39-203ENST00000409470 MAD1L1Q9Y6D9 718 aa21.32■■□□□ 1
USP39-203ENST00000409470 A0A1W2PPM1 405 aa21.31■■□□□ 1
USP39-203ENST00000409470 NCAM2O15394 837 aa21.31■■□□□ 1
USP39-203ENST00000409470 ZNF189O75820 626 aaPredicted RBP21.31■■□□□ 1
USP39-203ENST00000409470 LRIG2O94898 1065 aa21.31■■□□□ 1
USP39-203ENST00000409470 GBP2P32456 591 aaPredicted RBP21.31■■□□□ 1
USP39-203ENST00000409470 GATMP50440 423 aa21.31■■□□□ 1
USP39-203ENST00000409470 FAM171A1Q5VUB5 890 aa21.31■■□□□ 1
USP39-203ENST00000409470 CACNA2D3Q8IZS8 1091 aa21.31■■□□□ 1
USP39-203ENST00000409470 SGSM3Q96HU1 749 aa21.31■■□□□ 1
USP39-203ENST00000409470 NSRP1Q9H0G5 558 aaKnown RBP21.31■■□□□ 1
USP39-203ENST00000409470 SMG5Q9UPR3 1016 aaKnown RBP21.31■■□□□ 1
USP39-203ENST00000409470 PRPF4O43172 522 aaKnown RBP eCLIP21.31■■□□□ 1
USP39-203ENST00000409470 IRAK2O43187 625 aa21.31■■□□□ 1
USP39-203ENST00000409470 IGLV3-25P01717 112 aa21.31■■□□□ 1
USP39-203ENST00000409470 INHBAP08476 426 aa21.31■■□□□ 1
USP39-203ENST00000409470 SERPINB6P35237 376 aa21.31■■□□□ 1
USP39-203ENST00000409470 MAGEA3P43357 314 aa21.31■■□□□ 1
USP39-203ENST00000409470 CDK16Q00536 496 aa21.31■■□□□ 1
USP39-203ENST00000409470 WASHC5Q12768 1159 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms