RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SOBPA7XYQ1 873 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 CREB3O43889 395 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 ACSL4O60488 711 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 CD48P09326 243 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 PCK1P35558 622 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 ACAP1Q15027 740 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 AAK1Q2M2I8 961 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 FAM133BQ5BKY9 247 aaKnown RBP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 PPP6R3Q5H9R7 873 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 BRMS1LQ5PSV4 323 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 ERMARDQ5T6L9 678 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 HTR3DQ70Z44 454 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 LGI2Q8N0V4 545 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 CFAP52Q8N1V2 620 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 BTN2A3PQ96KV6 586 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 ALS2CR12Q96Q35 445 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 KCTD15Q96SI1 283 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 EBF3Q9H4W6 596 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 KCNK12Q9HB15 430 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 TRPV4Q9HBA0 871 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 DUS2Q9NX74 493 aaKnown RBP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 PLK2Q9NYY3 685 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 ZMYM5Q9UJ78 669 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 AMFRQ9UKV5 643 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 VANGL2Q9ULK5 521 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 SLC2A3P11169 496 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 GDI1P31150 447 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 SLC1A1P43005 524 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 SLC11A2P49281 568 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 GNG11P61952 73 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 MMRN1Q13201 1228 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 HADHQ16836 314 aaKnown RBP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 ARL13BQ3SXY8 428 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 EFHC2Q5JST6 749 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 AADACL2Q6P093 401 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 DDX42Q86XP3 938 aaKnown RBP eCLIP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 RAPGEF5Q92565 580 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 RNF25Q96BH1 459 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 ELSPBP1Q96BH3 223 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 C16orf45Q96MC5 204 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 PRICKLE1Q96MT3 831 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 NECAB3Q96P71 396 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 WDR24Q96S15 920 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 KIF9Q9HAQ2 790 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 SLC12A6Q9UHW9 1150 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 FAM50BQ9Y247 325 aa14.6□□□□□ -0.07
CHRNA1-204ENST00000409323 TICRRQ7Z2Z1 1910 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 E2F8A0AVK6 867 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 OTOL1A6NHN0 477 aaPredicted RBP14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 ANHXE9PGG2 379 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 KIF5CO60282 957 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 KRT1P04264 644 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 PSMC3P17980 439 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 TACR2P21452 398 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 WEE1P30291 646 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 IFNAR2P48551 515 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 CDH6P55285 790 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 RPS24P62847 133 aaKnown RBP14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 ZNF211Q13398 564 aaPredicted RBP14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 AUHQ13825 339 aaKnown RBP14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 PUS10Q3MIT2 529 aaKnown RBP14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 MTSS1LQ765P7 747 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 ANKS1BQ7Z6G8 1248 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 TMEM25Q86YD3 366 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 MFSD6LQ8IWD5 586 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 RHOT1Q8IXI2 618 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 YAF2Q8IY57 180 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 SYCE1Q8N0S2 351 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 NETO2Q8NC67 525 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 ALG3Q92685 438 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 CD101Q93033 1021 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 IGSF8Q969P0 613 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 GTSE1Q9NYZ3 720 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 MPP6Q9NZW5 540 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 STIM2Q9P246 746 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 OR12D3Q9UGF7 316 aa14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 ZFP37Q9Y6Q3 630 aaPredicted RBP14.59□□□□□ -0.07
CHRNA1-204ENST00000409323 LRRD1A4D1F6 860 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 FANCGO15287 622 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 NARSO43776 548 aaKnown RBP14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 ZP2Q05996 745 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 KRT81Q14533 505 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 ADGRF1Q5T601 910 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 RWDD4Q6NW29 188 aaKnown RBP14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 FBXL22Q6P050 247 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 ADHFE1Q8IWW8 467 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 KCTD6Q8NC69 237 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 TRIM58Q8NG06 486 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 OSCP1Q8WVF1 389 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 NTAN1Q96AB6 310 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 RPRD1AQ96P16 312 aaPredicted RBP14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 ASB2Q96Q27 587 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 PRMT1Q99873 361 aaKnown RBP14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 CALN1Q9BXU9 219 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 DCLK3Q9C098 648 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 COL4A3Q01955 1670 aa14.58□□□□□ -0.08
CHRNA1-204ENST00000409323 GOLGA6L9A6NEM1 432 aa14.57□□□□□ -0.08
CHRNA1-204ENST00000409323 LOC730098B7Z3J9 87 aa14.57□□□□□ -0.08
CHRNA1-204ENST00000409323 E9PAM4 449 aa14.57□□□□□ -0.08
CHRNA1-204ENST00000409323 F5H5T6 163 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms