RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CCZ1P86791 482 aaPredicted RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 OTUD4Q01804 1114 aaKnown RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 BST2Q10589 180 aaKnown RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 NECAB2Q7Z6G3 386 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 DSG4Q86SJ6 1040 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CCDC33Q8N5R6 958 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 RRN3Q9NYV6 651 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 ACOT9Q9Y305 439 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CNTNAP2Q9UHC6 1331 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 PNMA8CA0A1B0GUJ8 204 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 PRKAA2P54646 552 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 PTPAQ15257 358 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 RABL6Q3YEC7 729 aaPredicted RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 ZBTB49Q6ZSB9 765 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 ENGASEQ8NFI3 743 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 SAE1Q9UBE0 346 aaPredicted RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 ZMYND8Q9ULU4 1186 aaPredicted RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 ENTPD4Q9Y227 616 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CPS1P31327 1500 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 EFCAB10A6NFE3 127 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CCNT2O60583 730 aaKnown RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 FAM20BO75063 409 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 OR56A5P0C7T3 313 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 NQO1P15559 274 aaKnown RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 RASA1P20936 1047 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 SKIV2L2P42285 1042 aaKnown RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 RUSC1Q9BVN2 902 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 TAGLN3Q9UI15 199 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 MSH4O15457 936 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 KLHL41O60662 606 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 MYL4P12829 197 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 LBPP18428 481 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CYP11B2P19099 503 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 KCNMA1Q12791 1236 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 PTGISQ16647 500 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 MARC1Q5VT66 337 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 KIAA0408Q6ZU52 694 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 SH3BP5LQ7L8J4 393 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 KYQ8NBH2 561 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CSGALNACT1Q8TDX6 532 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 FIG4Q92562 907 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 PHF21BQ96EK2 531 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 SMARCD1Q96GM5 515 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 DUSP12Q9UNI6 340 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 FOXN3O00409 490 aaPredicted RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 DNAJB2P25686 324 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 PPIL2Q13356 520 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CSHL1Q14406 222 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 NAA30Q147X3 362 aaPredicted RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 TAB1Q15750 504 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 ERO1BQ86YB8 467 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 FAM205CA6NFA0 338 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 PDE9AO76083 593 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CLEC17AQ6ZS10 378 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 NT5DC3Q86UY8 548 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 COLGALT1Q8NBJ5 622 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 SPPL2AQ8TCT8 520 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 PROX1Q92786 737 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 RAD21L1Q9H4I0 556 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 CISHQ9NSE2 258 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 TMEM51Q9NW97 253 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 RHBDL2Q9NX52 303 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 NDOR1Q9UHB4 597 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 BAZ2AQ9UIF9 1905 aaKnown RBP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 SNPHO15079 494 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 NKRFO15226 690 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMCR8-201ENST00000406438 BCL10O95999 233 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 ITGA1P56199 1179 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 BACE1P56817 501 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 LRRC49Q8IUZ0 686 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 SPACA7Q96KW9 195 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 UGT2B28Q9BY64 529 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 ROGDIQ9GZN7 287 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 RXFP1Q9HBX9 757 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 TAS2R13Q9NYV9 303 aa12.32□□□□□ -0.44
SMCR8-201ENST00000406438 NINQ8N4C6 2090 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 HS6ST1O60243 411 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 RAMP2O60895 175 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 ANXA6P08133 673 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 CCDC130P13994 396 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 ADIGQ0VDE8 80 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 SPANXN3Q5MJ09 141 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 ZDHHC17Q8IUH5 632 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 C6orf62Q9GZU0 229 aaPredicted RBP12.31□□□□□ -0.44
SMCR8-201ENST00000406438 MFSD1Q9H3U5 465 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 DLC1Q96QB1 1528 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 TRIM66O15016 1216 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 MMP14P50281 582 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 DPY30Q9C005 99 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 UXTQ9UBK9 157 aaPredicted RBP12.31□□□□□ -0.44
SMCR8-201ENST00000406438 UBA2Q9UBT2 640 aaPredicted RBP12.31□□□□□ -0.44
SMCR8-201ENST00000406438 PIK3CDO00329 1044 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 PDE5AO76074 875 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 HLA-DQA2P01906 255 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 CYP2A6P11509 494 aaPredicted RBP12.31□□□□□ -0.44
SMCR8-201ENST00000406438 NUMBP49757 651 aa12.31□□□□□ -0.44
SMCR8-201ENST00000406438 ELAVL2Q12926 359 aaKnown RBP12.31□□□□□ -0.44
SMCR8-201ENST00000406438 TRMT5Q32P41 509 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms