RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 ATXN2LQ8WWM7 1075 aaKnown RBP29.92■■■□□ 2.38
CSNK1E-205ENST00000405675 HTR3CQ8WXA8 447 aa29.92■■■□□ 2.38
CSNK1E-205ENST00000405675 XPO6Q96QU8 1125 aaKnown RBP29.92■■■□□ 2.38
CSNK1E-205ENST00000405675 RABGEF1Q9UJ41 708 aa29.92■■■□□ 2.38
CSNK1E-205ENST00000405675 PRDM4Q9UKN5 801 aa29.92■■■□□ 2.38
CSNK1E-205ENST00000405675 TRAPPC3O43617 180 aa29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 ALDH2P05091 517 aa29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 RAG1P15918 1043 aa29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 EN2P19622 333 aaPredicted RBP29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 EFTUD2Q15029 972 aaKnown RBP eCLIP29.91■■■□□ 2.385e-18■■■□□ 18.3
CSNK1E-205ENST00000405675 PAFAH1B3Q15102 231 aaKnown RBP29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 VARS2Q5ST30 1063 aaKnown RBP29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 VSTM1Q6UX27 236 aa29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 SCN4BQ8IWT1 228 aa29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 B3GALT6Q96L58 329 aa29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 TKTL2Q9H0I9 626 aa29.91■■■□□ 2.38
CSNK1E-205ENST00000405675 HACD1B0YJ81 288 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 F9P00740 461 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 ATP5DP30049 168 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 PBX3P40426 434 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 PRKD1Q15139 912 aaPredicted RBP29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 CENPTQ96BT3 561 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 MRPL9Q9BYD2 267 aaKnown RBP29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 WDCPQ9H6R7 721 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 SRRM3A6NNA2 597 aaPredicted RBP29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 APRTP07741 180 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 ERCC2P18074 760 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 CCT5P48643 541 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 GPR15P49685 360 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 YWHAGP61981 247 aaKnown RBP eCLIP29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 SDHAF4Q5VUM1 108 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 C3orf62Q6ZUJ4 267 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 MRRFQ96E11 262 aaKnown RBP29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 ADAM28Q9UKQ2 775 aa29.9■■■□□ 2.38
CSNK1E-205ENST00000405675 NT5C1B-RDH14C9J2C7 533 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 NDUFAB1O14561 156 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 PIAS1O75925 651 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 TPI1P60174 286 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 SCD5Q86SK9 330 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 CAND1Q86VP6 1230 aaKnown RBP29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 TDRPQ86YL5 185 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 PALM2Q8IXS6 379 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 CCT8L2Q96SF2 557 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 GPR62Q9BZJ7 368 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 MARCH5Q9NX47 278 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 TEX264Q9Y6I9 313 aa29.89■■■□□ 2.38
CSNK1E-205ENST00000405675 SF3B1O75533 1304 aaKnown RBP eCLIP29.89■■■□□ 2.382e-6■■■■■ 43.1
CSNK1E-205ENST00000405675 IGLV3-25P01717 112 aa29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 ARL13BQ3SXY8 428 aa29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 PPP1R21Q6ZMI0 780 aa29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 BZW1Q7L1Q6 419 aaKnown RBP29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 TMCO2Q7Z6W1 182 aaPredicted RBP29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 CEP57Q86XR8 500 aa29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 DCP1BQ8IZD4 617 aaKnown RBP29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 RIBC1Q8N443 379 aaPredicted RBP29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 FBF1Q8TES7 1133 aa29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 PRDM12Q9H4Q4 367 aa29.89■■■□□ 2.37
CSNK1E-205ENST00000405675 GMNCA6NCL1 334 aa29.88■■■□□ 2.37
CSNK1E-205ENST00000405675 AP1B1Q10567 949 aa29.88■■■□□ 2.37
CSNK1E-205ENST00000405675 FAM171A1Q5VUB5 890 aa29.88■■■□□ 2.37
CSNK1E-205ENST00000405675 VPS52Q8N1B4 723 aa29.88■■■□□ 2.37
CSNK1E-205ENST00000405675 RSPH14Q9UHP6 348 aa29.88■■■□□ 2.37
CSNK1E-205ENST00000405675 TMEM120BA0PK00 339 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 GALTP07902 379 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 ACRP10323 421 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 MPP2Q14168 576 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 ANKRD20A2Q5SQ80 823 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 ANKRD20A1Q5TYW2 823 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 ANKRD20A3Q5VUR7 823 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 C4orf22Q6V702 233 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 ARHGEF18Q6ZSZ5 1173 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 TADA2BQ86TJ2 420 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 SRRM1Q8IYB3 904 aaKnown RBP29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 P2RY11Q96G91 374 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 PGLYRP2Q96PD5 576 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 FAM107BQ9H098 131 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 NMUR1Q9HB89 426 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 INTS9Q9NV88 658 aaKnown RBP29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 VWA8A3KMH1 1905 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 FNDC1Q4ZHG4 1894 aaPredicted RBP29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 A0A0A0MRY4 1105 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 ABHD14A-ACY1A0A1B0GW23 586 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 F5H423 210 aaPredicted RBP29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 SYN3O14994 580 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 PHBP35232 272 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 HCAR3P49019 387 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 EIF4EBP2Q13542 120 aaPredicted RBP29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 PDK1Q15118 436 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 DDR2Q16832 855 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 DENND5BQ6ZUT9 1274 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 ZNF534Q76KX8 674 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 BEND5Q7L4P6 421 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 LRRC43Q8N309 656 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 ZNF473Q8WTR7 871 aaKnown RBP29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 SPATA13Q96N96 652 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 CEP41Q9BYV8 373 aa29.87■■■□□ 2.37
CSNK1E-205ENST00000405675 CBLBQ13191 982 aa29.86■■■□□ 2.37
CSNK1E-205ENST00000405675 CTXN3Q4LDR2 81 aa29.86■■■□□ 2.37
CSNK1E-205ENST00000405675 TMEM173Q86WV6 379 aaPredicted RBP29.86■■■□□ 2.37
CSNK1E-205ENST00000405675 NPWQ8N729 165 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms