RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MMP8P22894 467 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 GGT5P36269 586 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 VPS41P49754 854 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 WDR5P61964 334 aaKnown RBP4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 SIM1P81133 766 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 SHC2P98077 582 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 DDX10Q13206 875 aaKnown RBP4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 ZNF169Q14929 603 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 MFSD13AQ14CX5 517 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 CTXN3Q4LDR2 81 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 UBAP2Q5T6F2 1119 aaKnown RBP4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 BBS12Q6ZW61 710 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 AMIGO2Q86SJ2 522 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 PPHLN1Q8NEY8 458 aaKnown RBP4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 OR52L2PQ8NGH6 319 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 SLC2A12Q8TD20 617 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 AKAP1Q92667 903 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 KCNJ9Q92806 393 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 SKA1Q96BD8 255 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 GPR78Q96P69 363 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 PIGSQ96S52 555 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 HDHD5Q9BXW7 423 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 TTYH1Q9H313 450 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 ACAD9Q9H845 621 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 NOD2Q9HC29 1040 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 PDE11AQ9HCR9 933 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 RASSF1Q9NS23 344 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 ZNF69Q9UC07 566 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 B3GNT3Q9Y2A9 372 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 MBD3L5A6NJ08 208 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 C1QTNF3-AMACRE9PGA6 284 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 CLIC1O00299 241 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 PRYO14603 147 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBX18O95935 607 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 HNRNPCP07910 306 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 ADH4P08319 380 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 MYCLP12524 364 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 KRT4P19013 534 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 TGM1P22735 817 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 NDUFS1P28331 727 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 STAT6P42226 847 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 AVPR1BP47901 424 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 CDK7P50613 346 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 B4GALNT1Q00973 533 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 TLE2Q04725 743 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 CDK18Q07002 472 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 GALNT2Q10471 571 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 EFR3AQ14156 821 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 ANKRD1Q15327 319 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D25Q3MII6 688 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 WDR93Q6P2C0 686 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 ANKRD16Q6P6B7 361 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 RSRC2Q7L4I2 434 aaKnown RBP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 WDR53Q7Z5U6 358 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 BCDIN3DQ7Z5W3 292 aaKnown RBP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 SFTPA1Q8IWL2 248 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 GALNT4Q8N4A0 578 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 TERB1Q8NA31 727 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 NGDNQ8NEJ9 315 aaKnown RBP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 GLMPQ8WWB7 406 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 ST8SIA4Q92187 359 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 ZUFSPQ96AP4 578 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 KAZALD1Q96I82 304 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 PDLIM2Q96JY6 352 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 HS6ST2Q96MM7 605 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 AGXT2Q9BYV1 514 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 CTDSP1Q9GZU7 261 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 OSBPL5Q9H0X9 879 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 ASB6Q9NWX5 421 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 MAP3K20Q9NYL2 800 aaKnown RBP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 SH3BP4Q9P0V3 963 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 ADAM21Q9UKJ8 722 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 FZD4Q9ULV1 537 aa4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 COPG1Q9Y678 874 aaKnown RBP4.34□□□□□ -1.71
HMGB1P17-201ENST00000403495 LMTK3Q96Q04 1460 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 SMIM22K7EJ46 135 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 MATN3O15232 486 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 ALDOAP04075 364 aaKnown RBP4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 CYP3A4P08684 503 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 ATF7P17544 494 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 CD72P21854 359 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 AVPR2P30518 371 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 KRT9P35527 623 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC37A1P57057 533 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 BLOC1S1P78537 153 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC14A1Q13336 389 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 TBRG1Q3YBR2 411 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 AARS2Q5JTZ9 985 aaKnown RBP4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 WDR78Q5VTH9 848 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 TMEM65Q6PI78 240 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 RNF144BQ7Z419 303 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 VPS52Q8N1B4 723 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 TCP11L2Q8N4U5 519 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 LINC01465Q8N7H1 131 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 ANKRD44Q8N8A2 993 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 ZBTB10Q96DT7 871 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 COQ10AQ96MF6 247 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 PHF7Q9BWX1 381 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms