RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TRMT1Q9NXH9 659 aaKnown RBP16.52■□□□□ 0.24
HMGA1-204ENST00000401473 TBC1D14Q9P2M4 693 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 HS3ST4Q9Y661 456 aa16.52■□□□□ 0.24
HMGA1-204ENST00000401473 USP27XA6NNY8 438 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 GFRA2O00451 464 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 KRT86O43790 486 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 MOCS3O95396 460 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 SLC11A2P49281 568 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 SLC25A11Q02978 314 aaKnown RBP16.52■□□□□ 0.23
HMGA1-204ENST00000401473 TDGQ13569 410 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 ATP13A4Q4VNC1 1196 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 ARHGAP29Q52LW3 1261 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 KCNT1Q5JUK3 1230 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 SLFN11Q7Z7L1 901 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 YAF2Q8IY57 180 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 PYROXD2Q8N2H3 581 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 ATP6V0D2Q8N8Y2 350 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 PRMT1Q99873 361 aaKnown RBP16.52■□□□□ 0.23
HMGA1-204ENST00000401473 IRX2Q9BZI1 471 aaPredicted RBP16.52■□□□□ 0.23
HMGA1-204ENST00000401473 FZD10Q9ULW2 581 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 ZNF510Q9Y2H8 683 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 CAPN6Q9Y6Q1 641 aa16.52■□□□□ 0.23
HMGA1-204ENST00000401473 GRID2IPA4D2P6 1211 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 FAM72CH0Y354 149 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 COMTP21964 271 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 FAM72AQ5TYM5 149 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 RAP1GAP2Q684P5 730 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 FAM72DQ6L9T8 149 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 TPGS1Q6ZTW0 290 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 C14orf80Q86SX3 495 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 FAM72BQ86X60 149 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 TXLNBQ8N3L3 684 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 LRRC57Q8N9N7 239 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 TTC8Q8TAM2 541 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 NTAN1Q96AB6 310 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 HAPLN3Q96S86 360 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 COL25A1Q9BXS0 654 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-204ENST00000401473 BRD9Q9H8M2 597 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 SLC12A6Q9UHW9 1150 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 DOCK4Q8N1I0 1966 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 TICRRQ7Z2Z1 1910 aa16.51■□□□□ 0.23
HMGA1-204ENST00000401473 SLC9A3R1O14745 358 aaPredicted RBP16.5■□□□□ 0.23
HMGA1-204ENST00000401473 LATS1O95835 1130 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 MAN1A1P33908 653 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 CHKAP35790 457 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 SGSHP51688 502 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 AUHQ13825 339 aaKnown RBP16.5■□□□□ 0.23
HMGA1-204ENST00000401473 CA9Q16790 459 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 SMTNL2Q2TAL5 461 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 LY6G5CQ5SRR4 150 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 ERMARDQ5T6L9 678 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 DAAM2Q86T65 1068 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 RNF10Q8N5U6 811 aaKnown RBP16.5■□□□□ 0.23
HMGA1-204ENST00000401473 BHMTQ93088 406 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 OTUB2Q96DC9 234 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 C1orf74Q96LT6 269 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 TSGA10Q9BZW7 698 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 ECT2Q9H8V3 914 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 SPHK2Q9NRA0 654 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 TMEM51Q9NW97 253 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 GPATCH2LQ9NWQ4 482 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 SORCS3Q9UPU3 1222 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 NUP205Q92621 2012 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 PRPSAP2O60256 369 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 TSPAN3O60637 253 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 RARAP10276 462 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 DESP17661 470 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 IFNAR2P48551 515 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 SCAPQ12770 1279 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 RUNX3Q13761 415 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 DHCR24Q15392 516 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 ARL13BQ3SXY8 428 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 FBXL22Q6P050 247 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 ZNF683Q8IZ20 524 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 CPXM2Q8N436 756 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 IRF7Q92985 503 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 CHFRQ96EP1 664 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 SNRNP25Q9BV90 132 aaKnown RBP16.5■□□□□ 0.23
HMGA1-204ENST00000401473 ZWILCHQ9H900 591 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 PLK2Q9NYY3 685 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 OR12D3Q9UGF7 316 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 LCMT1Q9UIC8 334 aa16.5■□□□□ 0.23
HMGA1-204ENST00000401473 PALMO75781 387 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 CYP17A1P05093 508 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 TACR2P21452 398 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 SSR1P43307 286 aaKnown RBP16.49■□□□□ 0.23
HMGA1-204ENST00000401473 PDGFRLQ15198 375 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 GAB4Q2WGN9 574 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 CFAP52Q8N1V2 620 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 KIAA1524Q8TCG1 905 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 ATP2A3Q93084 1043 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 IGSF8Q969P0 613 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 PRICKLE1Q96MT3 831 aaPredicted RBP16.49■□□□□ 0.23
HMGA1-204ENST00000401473 NCAPGQ9BPX3 1015 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 OSBPL2Q9H1P3 480 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 VANGL2Q9ULK5 521 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 DUSP12Q9UNI6 340 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
HMGA1-204ENST00000401473 ATG2BQ96BY7 2078 aa16.49■□□□□ 0.23
HMGA1-204ENST00000401473 SRFP11831 508 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms